RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 CA1P00915 261 aaPredicted RBP7.26□□□□□ -1.25
RFFL-208ENST00000581039 OR13C7P0DN81 318 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 FABP5Q01469 135 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 HACD4Q5VWC8 232 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 HSD17B13Q7Z5P4 300 aaPredicted RBP7.26□□□□□ -1.25
RFFL-208ENST00000581039 SPAG16Q8N0X2 631 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 GDPD1Q8N9F7 314 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 UBAC2Q8NBM4 344 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 OR10W1Q8NGF6 305 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 CMTM3Q96MX0 182 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 ATP6V0BQ99437 205 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 RHPN1-AS1Q9BWJ2 59 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 QTRT1Q9BXR0 403 aaKnown RBP7.26□□□□□ -1.25
RFFL-208ENST00000581039 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 ETV7Q9Y603 341 aa7.26□□□□□ -1.25
RFFL-208ENST00000581039 IGKV3-7A0A075B6H7 116 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 IGHV3-21A0A0B4J1V1 117 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 TRAV3A0A0B4J244 114 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 PRSS29PA6NIE9 313 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 IFITM5A6NNB3 132 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 CHEK1O14757 476 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 TNFSF12O43508 249 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 YIF1AO95070 293 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 HPRT1P00492 218 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 SERPINE2P07093 398 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 TRAPPC2P0DI81 140 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 TRAPPC2BP0DI82 140 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 NQO2P16083 231 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 OR10A3P58181 314 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 TAS2R31P59538 309 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 PAFAH1B2P68402 229 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 Q56UQ5 140 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 THOC7Q6I9Y2 204 aaKnown RBP7.25□□□□□ -1.25
RFFL-208ENST00000581039 TMEM116Q8NCL8 245 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 DMBX1Q8NFW5 382 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 SCARB1Q8WTV0 552 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 CCDC90BQ9GZT6 254 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 HRH4Q9H3N8 390 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 CCL28Q9NRJ3 127 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 ANXA10Q9UJ72 324 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 ABCA13Q86UQ4 5058 aa7.25□□□□□ -1.25
RFFL-208ENST00000581039 TRAV14DV4A0A0A6YYC5 116 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 TRAV1-2A0A0B4J238 106 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 IGHV7-4-1A0A0J9YVY3 117 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 SULT1C2O00338 296 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 RBFOX2O43251 390 aaKnown RBP eCLIP7.24□□□□□ -1.25
RFFL-208ENST00000581039 HLA-DMBP28068 263 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 RELQ04864 619 aaPredicted RBP7.24□□□□□ -1.25
RFFL-208ENST00000581039 WT1-ASQ06250 92 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 MLLT11Q13015 90 aaPredicted RBP7.24□□□□□ -1.25
RFFL-208ENST00000581039 CATR1Q13166 79 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 MSMO1Q15800 293 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 GBGT1Q8N5D6 347 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 ZBTB34Q8NCN2 500 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 SECTM1Q8WVN6 248 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 TMEM140Q9NV12 185 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 TPRKBQ9Y3C4 175 aa7.24□□□□□ -1.25
RFFL-208ENST00000581039 IGHV4-4A0A075B6R2 117 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 IGHV3-49A0A0A0MS15 119 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 TRAV10A0A0B4J240 114 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 TEX50A0A1B0GTY4 177 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 C15orf61A6NNL5 157 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 CASQ2O14958 399 aaPredicted RBP7.23□□□□□ -1.25
RFFL-208ENST00000581039 NUPL2O15504 423 aaKnown RBP7.23□□□□□ -1.25
RFFL-208ENST00000581039 CTSGP08311 255 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 FGF2P09038 288 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 RAB3BP20337 219 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 MYL9P24844 172 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 FCGR2CP31995 323 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 GNG2P59768 71 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 POU2AF1Q16633 256 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 PVRIGQ6DKI7 326 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 OR1L8Q8NGR8 309 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 NUDCD2Q8WVJ2 157 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 MGLLQ99685 303 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 HINT2Q9BX68 163 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 F11RQ9Y624 299 aaKnown RBP7.23□□□□□ -1.25
RFFL-208ENST00000581039 MUC4Q99102 2169 aa7.23□□□□□ -1.25
RFFL-208ENST00000581039 IGHV3OR16-13A0A075B7E8 117 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 IGHV3-74A0A0B4J1X5 117 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 TMEM235A6NFC5 223 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 F8W735 103 aaPredicted RBP7.22□□□□□ -1.25
RFFL-208ENST00000581039 DNASE2O00115 360 aaPredicted RBP7.22□□□□□ -1.25
RFFL-208ENST00000581039 RGS10O43665 173 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 CD5P06127 495 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 ARPC4P59998 168 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 ERVK-16P61578 105 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 RCN1Q15293 331 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 FAM90A2PQ658T7 463 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 LEMD1Q68G75 181 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 TCF24Q7RTU0 167 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 POM121L12Q8N7R1 296 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 Q8NAQ8 132 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 OR13F1Q8NGS4 319 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 LSM10Q969L4 123 aaKnown RBP7.22□□□□□ -1.25
RFFL-208ENST00000581039 DGCR14Q96DF8 476 aaKnown RBP7.22□□□□□ -1.25
RFFL-208ENST00000581039 OR10C1Q96KK4 312 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 RNF126Q9BV68 326 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 SLC5A7Q9GZV3 580 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms