RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
NDEL1-209ENST00000580738 RHPN1-AS1Q9BWJ2 59 aa13.91□□□□□ -0.18
NDEL1-209ENST00000580738 IGHV4-4A0A075B6R2 117 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 C15orf62A8K5M9 175 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 UPK2O00526 184 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 CHEK1O14757 476 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 HLA-DMBP28068 263 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 CMC4P56277 68 aaPredicted RBP13.9□□□□□ -0.18
NDEL1-209ENST00000580738 CDNFQ49AH0 187 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 SLC25A24Q6NUK1 477 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 GBGT1Q8N5D6 347 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 GDPD1Q8N9F7 314 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 COMMD5Q9GZQ3 224 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 HRH4Q9H3N8 390 aa13.9□□□□□ -0.18
NDEL1-209ENST00000580738 IGHV7-4-1A0A0J9YVY3 117 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 M0R2N4 97 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 SERPINE2P07093 398 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 RBMY1A1P0DJD3 496 aaKnown RBP13.89□□□□□ -0.19
NDEL1-209ENST00000580738 RBMY1CP0DJD4 496 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 OR13C7P0DN81 318 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 RAB6AP20340 208 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 RANBP1P43487 201 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 WT1-ASQ06250 92 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 RBMY1FQ15415 496 aaKnown RBP13.89□□□□□ -0.19
NDEL1-209ENST00000580738 Q6ZTC4 211 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 SPAG16Q8N0X2 631 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 UBAC2Q8NBM4 344 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 SCARB1Q8WTV0 552 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 SRSF8Q9BRL6 282 aaKnown RBP13.89□□□□□ -0.19
NDEL1-209ENST00000580738 QTRT1Q9BXR0 403 aaKnown RBP13.89□□□□□ -0.19
NDEL1-209ENST00000580738 C21orf62Q9NYP8 219 aa13.89□□□□□ -0.19
NDEL1-209ENST00000580738 METTL21EPA6NDL7 271 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 IFITM5A6NNB3 132 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 MRPS14O60783 128 aaKnown RBP13.88□□□□□ -0.19
NDEL1-209ENST00000580738 TRAM1Q15629 374 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 CNIH2Q6PI25 160 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 TMEM116Q8NCL8 245 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 AIFM2Q9BRQ8 373 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 ATG5Q9H1Y0 275 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 C8orf4Q9NR00 106 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 CCL28Q9NRJ3 127 aa13.88□□□□□ -0.19
NDEL1-209ENST00000580738 IGHV3OR16-13A0A075B7E8 117 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 IGHV3-74A0A0B4J1X5 117 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 TRAV10A0A0B4J240 114 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 IGHV4-28A0A0C4DH34 117 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 ERICH4A6NGS2 130 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 C15orf61A6NNL5 157 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 CTSGP08311 255 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 PSMA1P25786 263 aaKnown RBP13.87□□□□□ -0.19
NDEL1-209ENST00000580738 HACD4Q5VWC8 232 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 FAM90A2PQ658T7 463 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 NR2C2APQ86WQ0 139 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 NUDCD2Q8WVJ2 157 aa13.87□□□□□ -0.19
NDEL1-209ENST00000580738 K7EIM0 57 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 SULT1C2O00338 296 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 CYB5BO43169 146 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 TRAPPC2P0DI81 140 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 TRAPPC2BP0DI82 140 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 TAS2R31P59538 309 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 Q56UQ5 140 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 LEMD1Q68G75 181 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 SECTM1Q8WVN6 248 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 DCSTAMPQ9H295 470 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 TMEM140Q9NV12 185 aa13.86□□□□□ -0.19
NDEL1-209ENST00000580738 TEX50A0A1B0GTY4 177 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 RBFOX2O43251 390 aaKnown RBP eCLIP13.85□□□□□ -0.19
NDEL1-209ENST00000580738 GIG44P09565 113 aaPredicted RBP13.85□□□□□ -0.19
NDEL1-209ENST00000580738 NQO2P16083 231 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 POU2AF1Q16633 256 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 PVRIGQ6DKI7 326 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 ZNF575Q86XF7 245 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 POM121L12Q8N7R1 296 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 ATP6V0BQ99437 205 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 RNF126Q9BV68 326 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 ACOT13Q9NPJ3 140 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
NDEL1-209ENST00000580738 F11RQ9Y624 299 aaKnown RBP13.85□□□□□ -0.19
NDEL1-209ENST00000580738 TMEM235A6NFC5 223 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 PDCD5O14737 125 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 SSX5O60225 188 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 YIF1AO95070 293 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 HPRT1P00492 218 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 PTHLHP12272 177 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 DEFB131AP59861 70 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 ARL6IP1Q15041 203 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 OR10C1Q96KK4 312 aa13.84□□□□□ -0.19
NDEL1-209ENST00000580738 ELOA3CA0A087WX78 387 aaPredicted RBP13.83□□□□□ -0.2
NDEL1-209ENST00000580738 NUPL2O15504 423 aaKnown RBP13.83□□□□□ -0.2
NDEL1-209ENST00000580738 MLLT11Q13015 90 aaPredicted RBP13.83□□□□□ -0.2
NDEL1-209ENST00000580738 TCF24Q7RTU0 167 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 FAM24BQ8N5W8 94 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 DMBX1Q8NFW5 382 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 CMTM3Q96MX0 182 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 HINT2Q9BX68 163 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 SCN3BQ9NY72 215 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 HSPG2P98160 4391 aa13.83□□□□□ -0.2
NDEL1-209ENST00000580738 TRAV14DV4A0A0A6YYC5 116 aa13.82□□□□□ -0.2
NDEL1-209ENST00000580738 TRAV1-2A0A0B4J238 106 aa13.82□□□□□ -0.2
NDEL1-209ENST00000580738 FGF2P09038 288 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms