RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 EREGO14944 169 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 FABP7O15540 132 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 EIF4EP06730 217 aaKnown RBP9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 SRMP19623 302 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 PSMG4Q5JS54 123 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 DGCR14Q96DF8 476 aaKnown RBP9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 NRBF2Q96F24 287 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 TMEM59Q9BXS4 323 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 C12orf4Q9NQ89 552 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 THYN1Q9P016 225 aa9.71□□□□□ -0.86
CSNK1D-213ENST00000580446 K7EIM0 57 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 GNB3P16520 340 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 DEFB1P60022 68 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 DUSP18Q8NEJ0 188 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 OR10J5Q8NHC4 309 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 FAM30AQ9NZY2 134 aa9.7□□□□□ -0.86
CSNK1D-213ENST00000580446 PKHD1L1Q86WI1 4243 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 LOC102723971A0A1B0GUV8 181 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 G3V2T6 193 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 LALBAP00709 142 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 PRM2P04554 102 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 OR13C7P0DN81 318 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 BRWD1-AS2P59051 145 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 RPS11P62280 158 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 MRPL28Q13084 256 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 OXA1LQ15070 435 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 RPL22L1Q6P5R6 122 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 GDPD1Q8N9F7 314 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 NEU1Q99519 415 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 FNDC4Q9H6D8 234 aaPredicted RBP9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 HRASLSQ9HDD0 168 aa9.69□□□□□ -0.86
CSNK1D-213ENST00000580446 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 PNMA8CA0A1B0GUJ8 204 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 DCTN3O75935 186 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 P0C879 139 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 LIMS3P0CW19 117 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 LIMS4P0CW20 117 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 DEFB130BP0DP73 79 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 DEFB130AP0DP74 79 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 CELP19835 753 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 WT1-ASQ06250 92 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 Q499Y3 187 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 OR4A4PQ8NGN8 299 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 VSTM2AQ8TAG5 236 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 TCTEX1D2Q8WW35 142 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 CMSS1Q9BQ75 279 aaKnown RBP9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 TM2D1Q9BX74 207 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 C1QTNF4Q9BXJ3 329 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 MGAT4AQ9UM21 535 aa9.68□□□□□ -0.86
CSNK1D-213ENST00000580446 A0A087WTM6 91 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 TRBV6-7A0A0A0MS04 114 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 TEX48A0A1B0GUV7 120 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 AQP12BA6NM10 295 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 SERPINB10P48595 397 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 RELQ04864 619 aaPredicted RBP9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 TOMM20LQ6UXN7 152 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 AQP12AQ8IXF9 295 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 OR52I1Q8NGK6 324 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 ARHGAP5-AS1Q96IT6 56 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 GINS4Q9BRT9 223 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 CABLES2Q9BTV7 478 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 GABARAPL3Q9BY60 117 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 SPATA2Q9UM82 520 aa9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 MRPS7Q9Y2R9 242 aaKnown RBP9.67□□□□□ -0.86
CSNK1D-213ENST00000580446 FCN2Q15485 313 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 OR4S2Q8NH73 311 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 DCANP1Q8TF63 244 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 SMIM19Q96E16 107 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 GRAMD2BQ96HH9 432 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 HINT2Q9BX68 163 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 LPAR5Q9H1C0 372 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 HSF4Q9ULV5 492 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 PRELID3BQ9Y3B1 194 aa9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSNK1D-213ENST00000580446 H3BMM0 161 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 OXTP01178 125 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 FGF9P31371 208 aaPredicted RBP9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 ETV1P50549 477 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 PECRQ9BY49 303 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 GABARAPL1Q9H0R8 117 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 TAS2R8Q9NYW2 309 aa9.65□□□□□ -0.86
CSNK1D-213ENST00000580446 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 IGLV2-14P01704 120 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 SERPINE2P07093 398 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 CD37P11049 281 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 TMEM50BP56557 158 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 TAS2R43P59537 309 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 YIF1BQ5BJH7 314 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 RNASE12Q5GAN4 147 aaKnown RBP9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 GDF5OSQ5U4N7 250 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 AMIGO2Q86SJ2 522 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 SLC25A46Q96AG3 418 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 SLC29A1Q99808 456 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 UQCC2Q9BRT2 126 aa9.64□□□□□ -0.87
CSNK1D-213ENST00000580446 QTRT1Q9BXR0 403 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms