RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 FHL3Q13643 280 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 TMEM268Q5VZI3 342 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 DUSP18Q8NEJ0 188 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 TMEM167AQ8TBQ9 72 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 ABHD5Q8WTS1 349 aa14.95□□□□□ -0.02
LIMD2-209ENST00000580222 RBPMSQ93062 196 aaKnown RBP14.95□□□□□ -0.02
LIMD2-209ENST00000580222 IGHV7-81A0A0B4J1V7 117 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 C9orf170A2RU37 121 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 FCN1O00602 326 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 CDS2O95674 445 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 PJVKQ0ZLH3 352 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 TNXAQ16473 311 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 PRSS8Q16651 343 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 ASPHD1Q5U4P2 390 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 TEX38Q6PEX7 206 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 H2BFWTQ7Z2G1 175 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 LYG2Q86SG7 212 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 FOXRED2Q8IWF2 684 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 MMD2Q8IY49 270 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 SELENOHQ8IZQ5 122 aaKnown RBP14.94□□□□□ -0.02
LIMD2-209ENST00000580222 LGI3Q8N145 548 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 OR4A5Q8NH83 315 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 LHFPL5Q8TAF8 219 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 SEC22AQ96IW7 307 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 ZNF430Q9H8G1 570 aaPredicted RBP14.94□□□□□ -0.02
LIMD2-209ENST00000580222 PARP11Q9NR21 331 aa14.94□□□□□ -0.02
LIMD2-209ENST00000580222 ACTL6BO94805 426 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 CNIH1O95406 144 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 CX3CL1P78423 397 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 DHRS2Q13268 280 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 RNF152Q8N8N0 203 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 IL22RA2Q969J5 263 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 RRNAD1Q96FB5 475 aaKnown RBP14.93□□□□□ -0.02
LIMD2-209ENST00000580222 TMEM56Q96MV1 263 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 ALX4Q9H161 411 aaPredicted RBP14.93□□□□□ -0.02
LIMD2-209ENST00000580222 OR51J1Q9H342 316 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 TMEM56-RWDD3S4R434 201 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 DNAH10Q8IVF4 4471 aa14.93□□□□□ -0.02
LIMD2-209ENST00000580222 PIGBOS1A0A0B4J2F0 54 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 UPK2O00526 184 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 ATP6V0E1O15342 81 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 SNAPC5O75971 98 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 IGKV1-5P01602 117 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 SPNP16150 400 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 RPL8P62917 257 aaKnown RBP14.92□□□□□ -0.02
LIMD2-209ENST00000580222 NDPQ00604 133 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 ANKRD55Q3KP44 614 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 ZNF562Q6V9R5 426 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 SLC35G3Q8N808 338 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 OR52B4Q8NGK2 314 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 GRPEL2Q8TAA5 225 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 ARPC1AQ92747 370 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 SORL1Q92673 2214 aa14.92□□□□□ -0.02
LIMD2-209ENST00000580222 KIAA1109Q2LD37 5005 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 TRAV3A0A0B4J244 114 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 INMT-MINDY4F8WBC2 141 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 AP4M1O00189 453 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 OR9G9P0C7N8 305 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 MECP2P51608 486 aaKnown RBP14.91□□□□□ -0.02
LIMD2-209ENST00000580222 FXYD3Q14802 87 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 MRGPRG-AS1Q2M3A8 158 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 RGS21Q2M5E4 152 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 OR11H1Q8NG94 326 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 COQ8AQ8NI60 647 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 SEC22CQ9BRL7 303 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 NSG2Q9Y328 171 aa14.91□□□□□ -0.02
LIMD2-209ENST00000580222 RBMXL2O75526 392 aaKnown RBP14.9□□□□□ -0.02
LIMD2-209ENST00000580222 JTBO76095 146 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 HLA-GP17693 338 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 MAS1LP35410 378 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 OR2B8PP59922 312 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 FOXE3Q13461 319 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 CXorf66Q5JRM2 361 aaPredicted RBP14.9□□□□□ -0.02
LIMD2-209ENST00000580222 FAM219AQ8IW50 185 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 CADM3Q8N126 398 aa14.9□□□□□ -0.02
LIMD2-209ENST00000580222 FAM103A1Q9BTL3 118 aaKnown RBP14.9□□□□□ -0.02
LIMD2-209ENST00000580222 A0A0B4J2A0 478 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 A0A0G2JRQ6 117 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 DUXBA0A1W2PPF3 345 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 C15orf61A6NNL5 157 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 DHFRP00374 187 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 IL6RP08887 468 aaPredicted RBP14.89□□□□□ -0.03
LIMD2-209ENST00000580222 VDAC1P21796 283 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 RPL27AP46776 148 aaKnown RBP14.89□□□□□ -0.03
LIMD2-209ENST00000580222 INSL3P51460 131 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 SSBP2P81877 361 aaPredicted RBP14.89□□□□□ -0.03
LIMD2-209ENST00000580222 CFHR3Q02985 330 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 ECSCRQ19T08 205 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 IZUMO4Q1ZYL8 232 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 C10orf55Q5SWW7 151 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 LYZL2Q7Z4W2 148 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 LRTM2Q8N967 370 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 OR4A16Q8NH70 328 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 C4orf3Q8WVX3 66 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 SRSF12Q8WXF0 261 aaKnown RBP14.89□□□□□ -0.03
LIMD2-209ENST00000580222 PHB2Q99623 299 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 MARVELD1Q9BSK0 173 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 COMMD5Q9GZQ3 224 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 SHPKQ9UHJ6 478 aa14.89□□□□□ -0.03
LIMD2-209ENST00000580222 PRNDQ9UKY0 176 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms