RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 RELQ04864 619 aaPredicted RBP9.78□□□□□ -0.84
COPS3-214ENST00000577246 SPAG16Q8N0X2 631 aa9.78□□□□□ -0.84
COPS3-214ENST00000577246 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
COPS3-214ENST00000577246 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
COPS3-214ENST00000577246 A0A1B0GVY2 172 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 IFITM5A6NNB3 132 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 HPRT1P00492 218 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 BRWD1-AS2P59051 145 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 ARPC4P59998 168 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 MLLT11Q13015 90 aaPredicted RBP9.77□□□□□ -0.85
COPS3-214ENST00000577246 CATR1Q13166 79 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 RCN1Q15293 331 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 CDNFQ49AH0 187 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 HACD4Q5VWC8 232 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 SLC25A24Q6NUK1 477 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 TMEM116Q8NCL8 245 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 ZBTB34Q8NCN2 500 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 ATG5Q9H1Y0 275 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 VCXQ9H320 206 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 ETV7Q9Y603 341 aa9.77□□□□□ -0.85
COPS3-214ENST00000577246 TRAV1-2A0A0B4J238 106 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 IGHV7-4-1A0A0J9YVY3 117 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 C15orf61A6NNL5 157 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 UPK2O00526 184 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 DEFB4AO15263 64 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 NUPL2O15504 423 aaKnown RBP9.76□□□□□ -0.85
COPS3-214ENST00000577246 ZNF207O43670 478 aaKnown RBP9.76□□□□□ -0.85
COPS3-214ENST00000577246 SCGNO76038 276 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 SERPINE2P07093 398 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 TRAPPC2P0DI81 140 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 TRAPPC2BP0DI82 140 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 OR13C7P0DN81 318 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 MYL9P24844 172 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 TFPI2P48307 235 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 FABP5Q01469 135 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 POU2AF1Q16633 256 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 Q56UQ5 140 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 TMEM41BQ5BJD5 291 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 UBAC2Q8NBM4 344 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 DMBX1Q8NFW5 382 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 RNF2Q99496 336 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 RHPN1-AS1Q9BWJ2 59 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 ANXA10Q9UJ72 324 aa9.76□□□□□ -0.85
COPS3-214ENST00000577246 VPS13DQ5THJ4 4388 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 IGHV3OR16-8A0A075B7F1 116 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 PRSS29PA6NIE9 313 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 CHEK1O14757 476 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 TNFSF12O43508 249 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 DFFBO76075 338 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 GNG2P59768 71 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 ZNF124Q15973 351 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 PVRIGQ6DKI7 326 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 SCARB1Q8WTV0 552 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 SECTM1Q8WVN6 248 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 CHRDL1Q9BU40 450 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 TPRKBQ9Y3C4 175 aa9.75□□□□□ -0.85
COPS3-214ENST00000577246 F11RQ9Y624 299 aaKnown RBP9.75□□□□□ -0.85
COPS3-214ENST00000577246 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 CASQ2O14958 399 aaPredicted RBP9.74□□□□□ -0.85
COPS3-214ENST00000577246 YIF1AO95070 293 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 EIF4EP06730 217 aaKnown RBP9.74□□□□□ -0.85
COPS3-214ENST00000577246 P0DMU3 169 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 FAM231AP0DMU4 169 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 FAM231CP0DMU5 169 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 MIFP14174 115 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 OR10A3P58181 314 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 ERVK-16P61578 105 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 Q8NAQ8 132 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 OR10W1Q8NGF6 305 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 OR1L8Q8NGR8 309 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 LSM10Q969L4 123 aaKnown RBP9.74□□□□□ -0.85
COPS3-214ENST00000577246 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 PLEKHA2Q9HB19 425 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 COMMD9Q9P000 198 aa9.74□□□□□ -0.85
COPS3-214ENST00000577246 ELF5Q9UKW6 265 aaPredicted RBP9.74□□□□□ -0.85
COPS3-214ENST00000577246 IGKV3-7A0A075B6H7 116 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 TRAV14DV4A0A0A6YYC5 116 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 SULT1C2O00338 296 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 RGS10O43665 173 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 RAB3BP20337 219 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 HLA-DMBP28068 263 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 WT1-ASQ06250 92 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 STHQ8IWL8 128 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 OR13F1Q8NGS4 319 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 NUDCD2Q8WVJ2 157 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 BORCS5Q969J3 196 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 OR10C1Q96KK4 312 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 GPHA2Q96T91 129 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 MGLLQ99685 303 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 GINS3Q9BRX5 216 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 CCL28Q9NRJ3 127 aa9.73□□□□□ -0.85
COPS3-214ENST00000577246 IGHV3-21A0A0B4J1V1 117 aa9.72□□□□□ -0.85
COPS3-214ENST00000577246 TRAV3A0A0B4J244 114 aa9.72□□□□□ -0.85
COPS3-214ENST00000577246 TMEM235A6NFC5 223 aa9.72□□□□□ -0.85
COPS3-214ENST00000577246 DNASE2O00115 360 aaPredicted RBP9.72□□□□□ -0.85
COPS3-214ENST00000577246 CTSGP08311 255 aa9.72□□□□□ -0.85
COPS3-214ENST00000577246 FCGR2CP31995 323 aa9.72□□□□□ -0.85
COPS3-214ENST00000577246 ZNF773Q6PK81 442 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms