RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GPHA2Q96T91 129 aa7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 C20orf24Q9BUV8 137 aa7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 NXF2Q9GZY0 626 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 CCDC59Q9P031 241 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 ELF5Q9UKW6 265 aaPredicted RBP7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 SPATA2Q9UM82 520 aa7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 RBMX2Q9Y388 322 aaKnown RBP7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 PRELID3BQ9Y3B1 194 aa7.39□□□□□ -1.23
NPLOC4-220ENST00000576940 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 IGHV3-21A0A0B4J1V1 117 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 OR2T8A6NH00 312 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 M0R2N4 97 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 RTL8CO15255 209 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 TGOLN2O43493 480 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 DIRAS3O95661 229 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 NFYAP23511 347 aaPredicted RBP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 PTBP1P26599 531 aaKnown RBP eCLIP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 MAS1LP35410 378 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 RPL8P62917 257 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 TMEM91Q6ZNR0 172 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 VSTM2AQ8TAG5 236 aa7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 C6orf62Q9GZU0 229 aaPredicted RBP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 NAA50Q9GZZ1 169 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 C11orf68Q9H3H3 251 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 MRPS7Q9Y2R9 242 aaKnown RBP7.38□□□□□ -1.23
NPLOC4-220ENST00000576940 LRP1BQ9NZR2 4599 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 TRAV3A0A0B4J244 114 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 IGKV1D-13A0A0B4J2D9 117 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 TRDV1A0A1B0GX56 115 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 CCDC160A6NGH7 325 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 MFNGO00587 321 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 HLA-DQB1P01920 261 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 IGKV1-13P0DP09 117 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 HLA-GP17693 338 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 ADMP35318 185 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 OR2B8PP59922 312 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 HES5Q5TA89 166 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 LIPKQ5VXJ0 399 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 MFSD4AQ8N468 514 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 OR10R2Q8NGX6 335 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 OR4S2Q8NH73 311 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 TCTEX1D2Q8WW35 142 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 RNF2Q99496 336 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 CHRDL1Q9BU40 450 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 DAZ1Q9NQZ3 744 aaKnown RBP7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 RAB22AQ9UL26 194 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 OR2W1Q9Y3N9 320 aa7.37□□□□□ -1.23
NPLOC4-220ENST00000576940 IGHV4-4A0A075B6R2 117 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 IGHV3-49A0A0A0MS15 119 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 C11orf94C9JXX5 98 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 CA1P00915 261 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 GADD45AP24522 165 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 HLA-DMBP28068 263 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 TALDO1P37837 337 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 EIF4EBP1Q13541 118 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 TMEM187Q14656 261 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 OR10W1Q8NGF6 305 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 UFD1Q92890 307 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 HRASLSQ9HDD0 168 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 TAS2R8Q9NYW2 309 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 THYN1Q9P016 225 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 SMPXQ9UHP9 88 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 ETV7Q9Y603 341 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 V9GY05 133 aa7.36□□□□□ -1.23
NPLOC4-220ENST00000576940 IGLC7A0M8Q6 106 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 K7EMT4 169 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 NDUFA4O00483 81 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 TNFSF12O43508 249 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 HRASP01112 189 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 RBMY1A1P0DJD3 496 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 RBMY1CP0DJD4 496 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 HIST1H1DP16402 221 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 ETV6P41212 452 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 RPS25P62851 125 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 SPCS2Q15005 226 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 RBMY1FQ15415 496 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 SLC25A24Q6NUK1 477 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 Q6ZS49 121 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 Q6ZTC4 211 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 ZNF575Q86XF7 245 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 VN1R17PQ8TDU5 208 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 HSD17B10Q99714 261 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 SLIRPQ9GZT3 109 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 DCSTAMPQ9H295 470 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 BET1LQ9NYM9 111 aa7.35□□□□□ -1.23
NPLOC4-220ENST00000576940 IGHV3OR16-13A0A075B7E8 117 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 IGHV3-74A0A0B4J1X5 117 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 F8W735 103 aaPredicted RBP7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 UPK2O00526 184 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 CHEK1O14757 476 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 SLC22A5O76082 557 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 ZNF182P17025 639 aaPredicted RBP7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 CALRP27797 417 aaKnown RBP7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 CMC4P56277 68 aaPredicted RBP7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 LEMD1Q68G75 181 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 Q8NAQ8 132 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 UBAC2Q8NBM4 344 aa7.34□□□□□ -1.23
NPLOC4-220ENST00000576940 SCARB1Q8WTV0 552 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms