RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TNFSF18Q9UNG2 199 aa9.48□□□□□ -0.89
CDRT1-206ENST00000571263 STRAPQ9Y3F4 350 aaKnown RBP9.48□□□□□ -0.89
CDRT1-206ENST00000571263 SOX21Q9Y651 276 aaPredicted RBP9.48□□□□□ -0.89
CDRT1-206ENST00000571263 MDFIC2A0A1B0GVS7 189 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 G3V3Q6 166 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 FCN1O00602 326 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 RPL12P30050 165 aaKnown RBP9.47□□□□□ -0.89
CDRT1-206ENST00000571263 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
CDRT1-206ENST00000571263 CAV2P51636 162 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 GNB1P62873 340 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 CX3CL1P78423 397 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 PJVKQ0ZLH3 352 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 IL17RELQ6ZVW7 336 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 STX12Q86Y82 276 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 ARPC1AQ92747 370 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 AQP10Q96PS8 301 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 SMR3AQ99954 134 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 NPFFR1Q9GZQ6 430 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 MFFQ9GZY8 342 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 C11orf1Q9H5F2 150 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 ZC4H2Q9NQZ6 224 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 TPSG1Q9NRR2 321 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 OR5AC2Q9NZP5 309 aa9.47□□□□□ -0.89
CDRT1-206ENST00000571263 IGHV7-81A0A0B4J1V7 117 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 SMLR1H3BR10 107 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 CORTO00230 105 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 TAAR5O14804 337 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 ARPC5O15511 151 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 NXPH3O95157 252 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 IFNA10P01566 189 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 FAM157CP0CG43 387 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 EIF2B2P49770 351 aaKnown RBP9.46□□□□□ -0.9
CDRT1-206ENST00000571263 PAX9P55771 341 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 HBG1P69891 147 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 HBG2P69892 147 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 CD300CQ08708 224 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 AKIRIN2Q53H80 203 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 SPANXN5Q5MJ07 72 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 TMEM219Q86XT9 240 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 OR11H4Q8NGC9 324 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 GON7Q9BXV9 100 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 PRSS22Q9GZN4 317 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 ITPR2Q14571 2701 aa9.46□□□□□ -0.9
CDRT1-206ENST00000571263 ABCA1O95477 2261 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 TRIM77I1YAP6 450 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 IGHG2P01859 326 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 OPN1MWP04001 364 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 IGF1P05019 195 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 OPN1MW2P0DN77 364 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 OPN1MW3P0DN78 364 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 HKR1P10072 659 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 IAPPP10997 89 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 S100A11P31949 105 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 SULT1A1P50225 295 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 CRIP2P52943 208 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-206ENST00000571263 AP2S1P53680 142 aaPredicted RBP9.45□□□□□ -0.9
CDRT1-206ENST00000571263 ATP6V1FQ16864 119 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 C2orf83Q53S99 150 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 TMEM14EPQ6UXP3 125 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 TMEM252Q8N6L7 170 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 SLC24A4Q8NFF2 622 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 ABHD5Q8WTS1 349 aa9.45□□□□□ -0.9
CDRT1-206ENST00000571263 PINX1Q96BK5 328 aaKnown RBP9.45□□□□□ -0.9
CDRT1-206ENST00000571263 FAM24AA6NFZ4 105 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 NPIPB5A8MRT5 1133 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 TEX22C9J3V5 150 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 CRLF1O75462 422 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 AMY1AP04745 511 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 CRYGCP07315 174 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 OR8U8P0C7N1 319 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 OR13C7P0DN81 318 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 HIST1H1BP16401 226 aaKnown RBP9.44□□□□□ -0.9
CDRT1-206ENST00000571263 NPY1RP25929 384 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 BSXQ3C1V8 233 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 SLC35E3Q7Z769 313 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 STPG2Q8N412 459 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 KCNRGQ8N5I3 272 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 TTC9CQ8N5M4 171 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 OR10P1Q8NGE3 313 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 RNASEH2CQ8TDP1 164 aaKnown RBP9.44□□□□□ -0.9
CDRT1-206ENST00000571263 RBMXL1Q96E39 390 aaKnown RBP9.44□□□□□ -0.9
CDRT1-206ENST00000571263 GGACTQ9BVM4 153 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 THYN1Q9P016 225 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 HSPB11Q9Y547 144 aa9.44□□□□□ -0.9
CDRT1-206ENST00000571263 CREBBPQ92793 2442 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 KANTRA0A1W2PQU2 76 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 IGLC7A0M8Q6 106 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 INAFM1C9JVW0 142 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 E7EUB6 86 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 AP4M1O00189 453 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 DFFBO76075 338 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 BRI3O95415 125 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 TMEM50AO95807 157 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 CRYBA1P05813 215 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 MYOD1P15172 320 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms