RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 LINC00869P0C866 280 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 USF1P22415 310 aaPredicted RBP12.76□□□□□ -0.37
SMG6-207ENST00000570756 CYB561P49447 251 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 MUC15Q8N387 334 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 CORO2AQ92828 525 aa12.76□□□□□ -0.37
SMG6-207ENST00000570756 PI4KAP42356 2102 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 IZUMO1RA6ND01 250 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 PPBPP02775 128 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 LINC00205P59089 165 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 PSG5Q15238 335 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 GABRA6Q16445 453 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 Q6ZVH6 145 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 C1orf210Q8IVY1 113 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 C18orf32Q8TCD1 76 aa12.75□□□□□ -0.37
SMG6-207ENST00000570756 EP300Q09472 2414 aaPredicted RBP12.75□□□□□ -0.37
SMG6-207ENST00000570756 TRGV8A0A0C4DH27 118 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 GPR12P47775 334 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 FOXF2Q12947 444 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 ABHD12Q8N2K0 398 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 COL25A1Q9BXS0 654 aaPredicted RBP12.74□□□□□ -0.37
SMG6-207ENST00000570756 GP6Q9HCN6 339 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 PINLYPA6NC86 204 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 LAMTOR5O43504 91 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 GRPP07492 148 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 DUTP33316 252 aaKnown RBP12.74□□□□□ -0.37
SMG6-207ENST00000570756 VAMP3Q15836 100 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 TBC1D28Q2M2D7 210 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 MAJINQ3KP22 176 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 ZNF766Q5HY98 468 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 OR4F17Q8NGA8 305 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 WIPF2Q8TF74 440 aaPredicted RBP12.74□□□□□ -0.37
SMG6-207ENST00000570756 COQ2Q96H96 371 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 COMMD5Q9GZQ3 224 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 SERTAD4Q9NUC0 356 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 CACNA1DQ01668 2161 aa12.74□□□□□ -0.37
SMG6-207ENST00000570756 H0YJW9 148 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 SPINT2O43291 252 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 ADH4P08319 380 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 SSTR5P35346 364 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
SMG6-207ENST00000570756 UBE2G1P62253 170 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 TBR1Q16650 682 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 RTL8BQ17RB0 113 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 SMIM15Q7Z3B0 74 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 C1orf159Q96HA4 380 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 R4GN57 208 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 IGHV3-43A0A0B4J1X8 118 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 M0R2Z0 102 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 IGHV3-43DP0DP04 118 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 MGST1P10620 155 aaKnown RBP12.73□□□□□ -0.37
SMG6-207ENST00000570756 MRPL49Q13405 166 aaKnown RBP12.73□□□□□ -0.37
SMG6-207ENST00000570756 LPAL2Q16609 132 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 Q56UQ5 140 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 MIR17HGQ75NE6 70 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 OR8B3Q8NGG8 313 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 OR8B2Q96RD0 313 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 TECRQ9NZ01 308 aaKnown RBP12.73□□□□□ -0.37
SMG6-207ENST00000570756 B4GALT7Q9UBV7 327 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 HCFC1P51610 2035 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 CACNA1EQ15878 2313 aa12.73□□□□□ -0.37
SMG6-207ENST00000570756 IGHV3-64DA0A0J9YX35 117 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 PRR20EP86478 221 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 PRR20CP86479 221 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 PRR20DP86480 221 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 PRR20BP86481 221 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 PRR20AP86496 221 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 SSPNQ14714 243 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 LRRC10Q5BKY1 277 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 ETFRF1Q6IPR1 90 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 TRAT1Q6PIZ9 186 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 MDP1Q86V88 176 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 TCF19Q9Y242 345 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 ZFHX2Q9C0A1 2572 aaPredicted RBP12.72□□□□□ -0.37
SMG6-207ENST00000570756 DEFB108AA8MXU0 73 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 TNFSF15O95150 251 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 IGLL1P15814 213 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 NPY1RP25929 384 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 PPOXP50336 477 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 RELBQ01201 579 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 SLAQ13239 276 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 TNXAQ16473 311 aa12.72□□□□□ -0.37
SMG6-207ENST00000570756 ACTL6BO94805 426 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 Q0VFX4 171 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 KLF5Q13887 457 aaPredicted RBP12.71□□□□□ -0.37
SMG6-207ENST00000570756 PRR7Q8TB68 274 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 FAM216AQ8WUB2 273 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 LOXL4Q96JB6 756 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 GCM1Q9NP62 436 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 ENY2Q9NPA8 101 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 WDFY3Q8IZQ1 3526 aa12.71□□□□□ -0.37
SMG6-207ENST00000570756 FNDC10F2Z333 226 aa12.71□□□□□ -0.38
SMG6-207ENST00000570756 SP1P08047 785 aa12.71□□□□□ -0.38
SMG6-207ENST00000570756 OTX2P32243 289 aa12.71□□□□□ -0.38
SMG6-207ENST00000570756 TAS2R45P59539 299 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms