RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CACYBP	Q9HB71	228 aa	Known RBP	0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	PRTFDC1	Q9NRG1	225 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	UBQLN4	Q9NRR5	601 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	KCNIP2	Q9NS61	270 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	LYRM2	Q9NU23	88 aa	Predicted RBP	0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	ACER3	Q9NUN7	267 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	MED11	Q9P086	117 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	TAC3	Q9UHF0	121 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	RPUSD1	Q9UJJ7	312 aa	Known RBP	0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	JPT1	Q9UK76	154 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	OR52A1	Q9UKL2	312 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	TRAPPC2L	Q9UL33	140 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	SSR3	Q9UNL2	185 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	MRPS16	Q9Y3D3	137 aa	Known RBP	0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	DENND4B	O75064	1496 aa	Predicted RBP	0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	SOGA1	O94964	1423 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	NOS1	P29475	1434 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	KMT2E	Q8IZD2	1858 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	NAV1	Q8NEY1	1877 aa		0.97	□□□□□ -2.25
UBR1-209	ENST00000569243	KIF1B	O60333	1816 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CEP152	O94986	1710 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	PLXNB3	Q9ULL4	1909 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243		A0A087WX48	190 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	IGHV1-45	A0A0A0MS14	117 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	TRAV41	A0A0B4J266	112 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	VPS37C	A5D8V6	355 aa	Predicted RBP	0.96	□□□□□ -2.26
UBR1-209	ENST00000569243		A6NED7	52 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	EFCAB10	A6NFE3	127 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	C1orf196	B1AJZ1	125 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	ATP6V1G2-DDX39B	F2Z307	99 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243		H7C1C5	153 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	PIR	O00625	290 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	PLA2G10	O15496	165 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	GSTZ1	O43708	216 aa	Predicted RBP	0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	SLC37A4	O43826	429 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CST8	O60676	142 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	APOM	O95445	188 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	LTA	P01374	205 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	TRGV3	P03979	118 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	MAS1	P04201	325 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	C8G	P07360	202 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	HTR1A	P08908	422 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	COX4I1	P13073	169 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	SPI1	P17947	270 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OGN	P20774	298 aa	Known RBP	0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	S100A1	P23297	94 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CDK2	P24941	298 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	SRI	P30626	198 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CA7	P43166	264 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	GABRA2	P47869	451 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	KLF3	P57682	345 aa	Predicted RBP	0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	AP1S1	P61966	158 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	LCN6	P62502	163 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	SPCS2	Q15005	226 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OR8B8	Q15620	311 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CST6	Q15828	149 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	GRK1	Q15835	563 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	TNFAIP8L3	Q5GJ75	292 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	RPL13AP3	Q6NVV1	102 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	ANGPTL5	Q86XS5	388 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OR52R1	Q8NGF1	315 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OR9Q1	Q8NGQ5	310 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OR4K13	Q8NH42	304 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OR51H1	Q8NH63	302 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	FNDC9	Q8TBE3	224 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	DNAJC9	Q8WXX5	260 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	ACOT12	Q8WYK0	555 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	GALM	Q96C23	342 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	GPR146	Q96CH1	333 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	PYURF	Q96I23	114 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CARD19	Q96LW7	228 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	TRIB3	Q96RU7	358 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	LYSMD1	Q96S90	227 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	NMNAT3	Q96T66	252 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	SERPINI1	Q99574	410 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CCL13	Q99616	98 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	WDR61	Q9GZS3	305 aa	Known RBP	0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	SH3BGRL3	Q9H299	93 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	PARVB	Q9HBI1	364 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	ZNF286A	Q9HBT8	521 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	FBXL12	Q9NXK8	326 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	RASL12	Q9NYN1	266 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	PCTP	Q9UKL6	214 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	NUBP2	Q9Y5Y2	271 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	DOCK5	Q9H7D0	1870 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	CRB1	P82279	1406 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	LTBP2	Q14767	1821 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	OTOF	Q9HC10	1997 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	ABCC12	Q96J65	1359 aa		0.96	□□□□□ -2.26
UBR1-209	ENST00000569243	MYH2	Q9UKX2	1941 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	CCDC171	Q6TFL3	1326 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	CACNA1S	Q13698	1873 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	THSD7A	Q9UPZ6	1657 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	DOCK6	Q96HP0	2047 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	TRBV20OR9-2	A0A075B6H5	130 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	TRAV4	A0A0B4J268	109 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	IGHV1-69-2	A0A0G2JMI3	117 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243		A0A1B0GV50	99 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243	TMEM269	A0A1B0GVZ9	245 aa		0.95	□□□□□ -2.26
UBR1-209	ENST00000569243		A0A1B0GW64	132 aa		0.95	□□□□□ -2.26

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms