RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TNXAQ16473 311 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 IAH1Q2TAA2 248 aaPredicted RBP8.25□□□□□ -1.09
CDH3-210ENST00000569117 PDLIM3Q53GG5 364 aaPredicted RBP8.25□□□□□ -1.09
CDH3-210ENST00000569117 C10orf55Q5SWW7 151 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 TREML4Q6UXN2 200 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 GSG1LQ6UXU4 331 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 Q8N2B8 174 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 OR11H7Q8NGC8 314 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 OR4D5Q8NGN0 318 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
CDH3-210ENST00000569117 ARPC1AQ92747 370 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 OR10C1Q96KK4 312 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 CLCC1Q96S66 551 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 COMMD5Q9GZQ3 224 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 ZNF702PQ9H963 129 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.25□□□□□ -1.09
CDH3-210ENST00000569117 FKBP11Q9NYL4 201 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 CACFD1Q9UGQ2 172 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 OR51B2Q9Y5P1 312 aa8.25□□□□□ -1.09
CDH3-210ENST00000569117 NIPBLQ6KC79 2804 aaeCLIP8.25□□□□□ -1.09
CDH3-210ENST00000569117 C5orf51A6NDU8 294 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 SH2D7A6NKC9 451 aaPredicted RBP8.24□□□□□ -1.09
CDH3-210ENST00000569117 FAM90A26D6RGX4 464 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 ST8SIA3O43173 380 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 TRAPPC2P0DI81 140 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 TRAPPC2BP0DI82 140 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 MYOD1P15172 320 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 CXCL3P19876 107 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 RPL27AP46776 148 aaKnown RBP8.24□□□□□ -1.09
CDH3-210ENST00000569117 CRIP2P52943 208 aaPredicted RBP8.24□□□□□ -1.09
CDH3-210ENST00000569117 H2BFSP57053 126 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 GNB1P62873 340 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 BLCAPP62952 87 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 PRCDQ00LT1 54 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 FXYD3Q14802 87 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 FCN2Q15485 313 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 ZBTB8BQ8NAP8 495 aaPredicted RBP8.24□□□□□ -1.09
CDH3-210ENST00000569117 OR52E5Q8NH55 327 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 OR1S1Q8NH92 325 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 ASB13Q8WXK3 278 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 C2orf50Q96LR7 162 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 PDCD10Q9BUL8 212 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 QTRT1Q9BXR0 403 aaKnown RBP8.24□□□□□ -1.09
CDH3-210ENST00000569117 PRSS22Q9GZN4 317 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 HSPB7Q9UBY9 170 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 ZNF580Q9UK33 172 aa8.24□□□□□ -1.09
CDH3-210ENST00000569117 NF1P21359 2839 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 TEX50A0A1B0GTY4 177 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 A0A1B0GVG6 124 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 C13orf42A0A1B0GVH6 325 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 A0A1B0GW64 132 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 CGB1A6NKQ9 187 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 TSPAN9O75954 239 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 NDUFA7O95182 113 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 CNIH1O95406 144 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 SIX6O95475 246 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 IGF1P05019 195 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
CDH3-210ENST00000569117 SPCS3P61009 180 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 HSPE1P61604 102 aaKnown RBP8.23□□□□□ -1.09
CDH3-210ENST00000569117 TNFRSF9Q07011 255 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 SRSF4Q08170 494 aaKnown RBP8.23□□□□□ -1.09
CDH3-210ENST00000569117 Q6ZSV7 163 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 SLC35E3Q7Z769 313 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 OR1L8Q8NGR8 309 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 SGMS2Q8NHU3 365 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 GRPEL2Q8TAA5 225 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 SRSF8Q9BRL6 282 aaKnown RBP8.23□□□□□ -1.09
CDH3-210ENST00000569117 NMES1Q9C002 83 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 PARP11Q9NR21 331 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 NDUFA4L2Q9NRX3 87 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 FBXO7Q9Y3I1 522 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 C2CD3Q4AC94 2353 aa8.23□□□□□ -1.09
CDH3-210ENST00000569117 IGLC7A0M8Q6 106 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 HMX3A6NHT5 357 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 TEX22C9J3V5 150 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 E7EUB6 86 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 AP4M1O00189 453 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 IFNA17P01571 189 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 CRYBA1P05813 215 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 GIPP09681 153 aaPredicted RBP8.22□□□□□ -1.09
CDH3-210ENST00000569117 CYCSP99999 105 aaKnown RBP8.22□□□□□ -1.09
CDH3-210ENST00000569117 IL15RAQ13261 267 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 C19orf54Q5BKX5 351 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 CXorf66Q5JRM2 361 aaPredicted RBP8.22□□□□□ -1.09
CDH3-210ENST00000569117 C9orf152Q5JTZ5 239 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 HSD17B13Q7Z5P4 300 aaPredicted RBP8.22□□□□□ -1.09
CDH3-210ENST00000569117 ABHD5Q8WTS1 349 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 FYTTD1Q96QD9 318 aaKnown RBP8.22□□□□□ -1.09
CDH3-210ENST00000569117 ZNF436Q9C0F3 470 aaPredicted RBP8.22□□□□□ -1.09
CDH3-210ENST00000569117 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
CDH3-210ENST00000569117 A0A1W2PN81 502 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 LINC01548A6NM66 108 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 MED6O75586 246 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 NXPH3O95157 252 aa8.21□□□□□ -1.1
CDH3-210ENST00000569117 MBPP02686 304 aaPredicted RBP8.21□□□□□ -1.1
CDH3-210ENST00000569117 OPN1MWP04001 364 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms