RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 TRBV7-1A0A0A6YYK4 115 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 TEX50A0A1B0GTY4 177 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 NAT1P18440 290 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 FAM106AQ4KMX7 169 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 ZNF585BQ52M93 769 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 AIFM2Q9BRQ8 373 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 COMMD5Q9GZQ3 224 aa17.77■□□□□ 0.44
RAB40C-209ENST00000565511 IGHV3-21A0A0B4J1V1 117 aa17.76■□□□□ 0.43
RAB40C-209ENST00000565511 EIF4EP06730 217 aaKnown RBP17.76■□□□□ 0.43
RAB40C-209ENST00000565511 TMEM69Q5SWH9 247 aa17.76■□□□□ 0.43
RAB40C-209ENST00000565511 GDPD1Q8N9F7 314 aa17.76■□□□□ 0.43
RAB40C-209ENST00000565511 FCAMRQ8WWV6 532 aa17.76■□□□□ 0.43
RAB40C-209ENST00000565511 S100A16Q96FQ6 103 aaKnown RBP17.76■□□□□ 0.43
RAB40C-209ENST00000565511 CXorf58Q96LI9 332 aa17.76■□□□□ 0.43
RAB40C-209ENST00000565511 BIRC6Q9NR09 4857 aa17.76■□□□□ 0.43
RAB40C-209ENST00000565511 DBX1A6NMT0 343 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 MARCH11A6NNE9 402 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 TMEM127O75204 238 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 C8orf88P0DMB2 117 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 OR13C7P0DN81 318 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 LPAR6P43657 344 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 LYSMD2Q8IV50 215 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 CD300LFQ8TDQ1 290 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 ZNF414Q96IQ9 312 aa17.75■□□□□ 0.43
RAB40C-209ENST00000565511 SRSF8Q9BRL6 282 aaKnown RBP17.75■□□□□ 0.43
RAB40C-209ENST00000565511 ZNF436Q9C0F3 470 aaPredicted RBP17.75■□□□□ 0.43
RAB40C-209ENST00000565511 F8W735 103 aaPredicted RBP17.74■□□□□ 0.43
RAB40C-209ENST00000565511 FGF2P09038 288 aa17.74■□□□□ 0.43
RAB40C-209ENST00000565511 F2RP25116 425 aa17.74■□□□□ 0.43
RAB40C-209ENST00000565511 PTBP1P26599 531 aaKnown RBP eCLIP17.74■□□□□ 0.43
RAB40C-209ENST00000565511 G6PCP35575 357 aa17.74■□□□□ 0.43
RAB40C-209ENST00000565511 OR5H2Q8NGV7 314 aa17.74■□□□□ 0.43
RAB40C-209ENST00000565511 NDUFA4L2Q9NRX3 87 aa17.74■□□□□ 0.43
RAB40C-209ENST00000565511 TGOLN2O43493 480 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 SERPINE2P07093 398 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 TRAPPC2P0DI81 140 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 TRAPPC2BP0DI82 140 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 HRH1P35367 487 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 CROCCP3Q8IVE0 287 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 OR52B4Q8NGK2 314 aa17.73■□□□□ 0.43
RAB40C-209ENST00000565511 DGCR14Q96DF8 476 aaKnown RBP17.73■□□□□ 0.43
RAB40C-209ENST00000565511 OR2T8A6NH00 312 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 KRASP01116 189 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 HLA-DMAP28067 261 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 NCS1P62166 190 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 PHLDA2Q53GA4 152 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 PLET1Q6UQ28 207 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 OR1L8Q8NGR8 309 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 GPX8Q8TED1 209 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 TMEM190Q8WZ59 177 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 CHRDL1Q9BU40 450 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 HINT2Q9BX68 163 aa17.72■□□□□ 0.43
RAB40C-209ENST00000565511 IGHV3OR16-8A0A075B7F1 116 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 PRSS3P35030 304 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 TAS2R46P59540 309 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 ERVK-16P61578 105 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 SLC25A24Q6NUK1 477 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 SLC16A13Q7RTY0 426 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 TSPAN14Q8NG11 270 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 VN1R17PQ8TDU5 208 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 SLC25A46Q96AG3 418 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 OR51B2Q9Y5P1 312 aa17.71■□□□□ 0.43
RAB40C-209ENST00000565511 F11RQ9Y624 299 aaKnown RBP17.71■□□□□ 0.43
RAB40C-209ENST00000565511 K7EIM0 57 aa17.7■□□□□ 0.42
RAB40C-209ENST00000565511 GPR31O00270 319 aa17.7■□□□□ 0.42
RAB40C-209ENST00000565511 ADMP35318 185 aa17.7■□□□□ 0.42
RAB40C-209ENST00000565511 A0A087WXM4 84 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 IGKV1-39P01597 117 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 IGKV1D-39P04432 117 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 THOC7Q6I9Y2 204 aaKnown RBP17.69■□□□□ 0.42
RAB40C-209ENST00000565511 SCARB1Q8WTV0 552 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 BORCS5Q969J3 196 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 LSM10Q969L4 123 aaKnown RBP17.69■□□□□ 0.42
RAB40C-209ENST00000565511 MARC2Q969Z3 335 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 OVOL2Q9BRP0 275 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 GGTLC1Q9BX51 225 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 MRPL27Q9P0M9 148 aaKnown RBP17.69■□□□□ 0.42
RAB40C-209ENST00000565511 COMMD3Q9UBI1 195 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 UFC1Q9Y3C8 167 aa17.69■□□□□ 0.42
RAB40C-209ENST00000565511 ZNF207O43670 478 aaKnown RBP17.68■□□□□ 0.42
RAB40C-209ENST00000565511 ELLP55199 621 aaPredicted RBP17.68■□□□□ 0.42
RAB40C-209ENST00000565511 SNX29P2Q8IUI4 249 aa17.68■□□□□ 0.42
RAB40C-209ENST00000565511 OR6F1Q8NGZ6 308 aa17.68■□□□□ 0.42
RAB40C-209ENST00000565511 THYN1Q9P016 225 aa17.68■□□□□ 0.42
RAB40C-209ENST00000565511 UBQLN2Q9UHD9 624 aa17.68■□□□□ 0.42
RAB40C-209ENST00000565511 TRAV25A0A0B4J276 109 aa17.67■□□□□ 0.42
RAB40C-209ENST00000565511 VBP1P61758 197 aa17.67■□□□□ 0.42
RAB40C-209ENST00000565511 OR1L6Q8NGR2 347 aa17.67■□□□□ 0.42
RAB40C-209ENST00000565511 FUNDC2Q9BWH2 189 aa17.67■□□□□ 0.42
RAB40C-209ENST00000565511 TMEM14BQ9NUH8 114 aa17.67■□□□□ 0.42
RAB40C-209ENST00000565511 C21orf62Q9NYP8 219 aa17.67■□□□□ 0.42
RAB40C-209ENST00000565511 C15orf61A6NNL5 157 aa17.66■□□□□ 0.42
RAB40C-209ENST00000565511 HSD17B13Q7Z5P4 300 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-209ENST00000565511 TBC1D26Q86UD7 250 aa17.66■□□□□ 0.42
RAB40C-209ENST00000565511 CMTM1Q8IZ96 169 aa17.66■□□□□ 0.42
RAB40C-209ENST00000565511 CADM3Q8N126 398 aa17.66■□□□□ 0.42
RAB40C-209ENST00000565511 BSCL2Q96G97 398 aaPredicted RBP17.66■□□□□ 0.42
RAB40C-209ENST00000565511 LOC102724200A0A096LPH7 203 aaPredicted RBP17.65■□□□□ 0.42
RAB40C-209ENST00000565511 HPGDSO60760 199 aa17.65■□□□□ 0.42
RAB40C-209ENST00000565511 TNFAIP8O95379 198 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms