RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 B4DSR2 109 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 MPDU1O75352 247 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 IFNA4P05014 189 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 BRS3P32247 399 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 SNCAP37840 140 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 CAMLGP49069 296 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 PRB3Q04118 309 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-210ENST00000564587 PRSS8Q16651 343 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 AKR1C8PQ5T2L2 129 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 CENPVQ7Z7K6 275 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-210ENST00000564587 THNSL2Q86YJ6 484 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 COMMD1Q8N668 190 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 NPBQ8NG41 125 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
COMMD4-210ENST00000564587 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 C1orf159Q96HA4 380 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 FAM210AQ96ND0 272 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 PSMG3-AS1Q96PY0 264 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 SRSF8Q9BRL6 282 aaKnown RBP12.51□□□□□ -0.41
COMMD4-210ENST00000564587 KIAA1456Q9P272 454 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 SIGLEC9Q9Y336 463 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 HILPDAQ9Y5L2 63 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
COMMD4-210ENST00000564587 ABCA12Q86UK0 2595 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 TRAV20A0A0B4J274 112 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 C17orf112F2Z3M2 114 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 MSMBP08118 114 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 SNRNP70P08621 437 aaKnown RBP12.5□□□□□ -0.41
COMMD4-210ENST00000564587 COMPP49747 757 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-210ENST00000564587 EBI3Q14213 229 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 BSXQ3C1V8 233 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 UQCC3Q6UW78 93 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
COMMD4-210ENST00000564587 LHFPL4Q7Z7J7 247 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 PPP1R27Q86WC6 154 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 SH3BGRL3Q9H299 93 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
COMMD4-210ENST00000564587 FBXO7Q9Y3I1 522 aa12.5□□□□□ -0.41
COMMD4-210ENST00000564587 UBE2L5PA0A1B0GUS4 154 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 TEX46H3BTG2 121 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 RRHO14718 337 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 NBR2O15453 112 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 CA2P00918 260 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 MBP02144 154 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 RPL27AP46776 148 aaKnown RBP12.49□□□□□ -0.41
COMMD4-210ENST00000564587 RAB2AP61019 212 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 SSX2Q16385 188 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 AANATQ16613 207 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 DEFB113Q30KQ7 82 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 LDLRAD2Q5SZI1 272 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 Q6ZRG5 221 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 LFNGQ8NES3 379 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 LYPD6BQ8NI32 183 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 MBD6Q96DN6 1003 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 REG4Q9BYZ8 158 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 KCNIP2Q9NS61 270 aa12.49□□□□□ -0.41
COMMD4-210ENST00000564587 ANKRD34BA5PLL1 514 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 BTBD17A6NE02 478 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 PRSS46E5RG02 174 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 NPFFO15130 113 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 NDUFA3O95167 84 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 IGKV1D-33P01593 117 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 IGKV1-33P01594 117 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 FAM106CPP0CH98 169 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 FGF7P21781 194 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 PLGLAQ15195 96 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 BTNL8Q6UX41 500 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 CACNG8Q8WXS5 425 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 NRGNQ92686 78 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
COMMD4-210ENST00000564587 RITA1Q96K30 269 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 NPVFQ9HCQ7 196 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 PLA2G2EQ9NZK7 142 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 C1RLQ9NZP8 487 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 WDR83OSQ9Y284 106 aa12.48□□□□□ -0.41
COMMD4-210ENST00000564587 TNCP24821 2201 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 TSPAN15O95858 294 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 HBE1P02100 147 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 OPN1MWP04001 364 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 OPN1MW2P0DN77 364 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 OPN1MW3P0DN78 364 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 RNASE2P10153 161 aaKnown RBP12.47□□□□□ -0.41
COMMD4-210ENST00000564587 MDKP21741 143 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-210ENST00000564587 COL8A1P27658 744 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
COMMD4-210ENST00000564587 RUNX1Q01196 453 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 RAB31Q13636 194 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 HES1Q14469 280 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 MMDQ15546 238 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 TNXAQ16473 311 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 PRSS57Q6UWY2 283 aa12.47□□□□□ -0.41
COMMD4-210ENST00000564587 RNASEH2CQ8TDP1 164 aaKnown RBP12.47□□□□□ -0.41
COMMD4-210ENST00000564587 WNK2Q9Y3S1 2297 aa12.46□□□□□ -0.41
COMMD4-210ENST00000564587 USP9YO00507 2555 aaPredicted RBP12.46□□□□□ -0.41
COMMD4-210ENST00000564587 IGHV1-69DA0A0B4J2H0 117 aa12.46□□□□□ -0.41
COMMD4-210ENST00000564587 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.41
COMMD4-210ENST00000564587 A0A1W2PRD5 423 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms