RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ZBTB25P24278 435 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 PSMB6P28072 239 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 TMEM50BP56557 158 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 DEFB131AP59861 70 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 PRSS8Q16651 343 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 GLT8D1Q68CQ7 371 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 LAIR2Q6ISS4 152 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 TMPRSS11AQ6ZMR5 421 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 ZNF705AQ6ZN79 300 aaPredicted RBP7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 C19orf35Q6ZS72 473 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 FAM89BQ8N5H3 189 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 NKAIN3Q8N8D7 197 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 NEDD4LQ96PU5 975 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 SDHAF2Q9NX18 166 aa7.09□□□□□ -1.27
HDGFL3-204ENST00000563790 ZNF705FA8MVS1 300 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 NPIPB6E9PJ23 425 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 M0R1X1 148 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 SOCS1O15524 211 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 IGHV3-23P01764 117 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 CD3GP09693 182 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 ZNF705DP0CH99 300 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 ZNF705BP0CI00 300 aaPredicted RBP7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 HOXA5P20719 270 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 TAGLNQ01995 201 aaKnown RBP7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 ESRGQ1W209 222 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 C10orf55Q5SWW7 151 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 TTC9CQ8N5M4 171 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 Q8N814 137 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 TMEM190Q8WZ59 177 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 HARBI1Q96MB7 349 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 FANCD2OSQ96PS1 177 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 GFI1Q99684 422 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 TMEM59Q9BXS4 323 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 DPH3P1Q9H4G8 78 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 DNAJC4Q9NNZ3 241 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 RDH8Q9NYR8 311 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 ORC6Q9Y5N6 252 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 RFNGQ9Y644 331 aa7.08□□□□□ -1.28
HDGFL3-204ENST00000563790 PNMA8CA0A1B0GUJ8 204 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 LINC00473A8K010 186 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 TEX22C9J3V5 150 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 E7EUB6 86 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 APOA2P02652 100 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 CRYGCP07315 174 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 UBBP0CG47 229 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 UBE2KP61086 200 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 PLAC9Q5JTB6 97 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 IDO2Q6ZQW0 420 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 CEACAM19Q7Z692 300 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 PHB2Q99623 299 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 CABLES2Q9BTV7 478 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 ZNF436Q9C0F3 470 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 RIMS4Q9H426 269 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 ZNF430Q9H8G1 570 aaPredicted RBP7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 KCNK7Q9Y2U2 307 aa7.07□□□□□ -1.28
HDGFL3-204ENST00000563790 FCGBPQ9Y6R7 5405 aaPredicted RBP7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 GSTT2P0CG29 244 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 GSTT2BP0CG30 244 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 SRMP19623 302 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 GGHQ92820 318 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 RNF2Q99496 336 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 C1QTNF4Q9BXJ3 329 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 OR2D2Q9H210 308 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 C12orf4Q9NQ89 552 aa7.06□□□□□ -1.28
HDGFL3-204ENST00000563790 TRBV6-7A0A0A0MS04 114 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 F5H768 121 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 IL6RP08887 468 aaPredicted RBP7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 SAA1P0DJI8 122 aaPredicted RBP7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 GNB3P16520 340 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 CELP19835 753 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 DUTP33316 252 aaKnown RBP7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 BRWD1-AS2P59051 145 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 PLA2G7Q13093 441 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 ASAH1Q13510 395 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 TNXAQ16473 311 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 IGSF11Q5DX21 431 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 MFSD4AQ8N468 514 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 SETD6Q8TBK2 473 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 PHYHIPQ92561 330 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 TMEM80Q96HE8 168 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 ZNF414Q96IQ9 312 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 OR2A7Q96R45 310 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 PAXXQ9BUH6 204 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 CHMP1AQ9HD42 196 aaPredicted RBP7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 PLEKHJ1Q9NW61 149 aa7.05□□□□□ -1.28
HDGFL3-204ENST00000563790 IGHV3-35A0A0C4DH35 117 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 HMX3A6NHT5 357 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 CGB1A6NKQ9 187 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 TRDCB7Z8K6 153 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 SIVA1O15304 175 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 BPNT1O95861 308 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 MYL12AP19105 171 aa7.04□□□□□ -1.28
HDGFL3-204ENST00000563790 TAS2R43P59537 309 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms