RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 A8MWP6 167 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 GPR31O00270 319 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 SCAF4O95104 1147 aaKnown RBP11.84□□□□□ -0.51
SF3B3-203ENST00000562874 KRASP01116 189 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 OR13C7P0DN81 318 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 CBLN1P23435 193 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 WT1-ASQ06250 92 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 KLK9Q2XQG4 91 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 TM4SF20Q53R12 229 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 DHRS11Q6UWP2 260 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 GPHB5Q86YW7 130 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 LYSMD2Q8IV50 215 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 LAX1Q8IWV1 398 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 GDPD1Q8N9F7 314 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 OR6F1Q8NGZ6 308 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 ZNF502Q8TBZ5 544 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 CD300LFQ8TDQ1 290 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 GPX8Q8TED1 209 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 DGCR14Q96DF8 476 aaKnown RBP11.84□□□□□ -0.51
SF3B3-203ENST00000562874 CXorf58Q96LI9 332 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 NAA50Q9GZZ1 169 aaKnown RBP11.84□□□□□ -0.51
SF3B3-203ENST00000562874 KLK9Q9UKQ9 250 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 SACSQ9NZJ4 4579 aa11.84□□□□□ -0.51
SF3B3-203ENST00000562874 CSMD3Q7Z407 3707 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 TRBV7-1A0A0A6YYK4 115 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 TEX50A0A1B0GTY4 177 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 RBMY1BA6NDE4 496 aaKnown RBP11.83□□□□□ -0.52
SF3B3-203ENST00000562874 RBMY1EA6NEQ0 496 aaKnown RBP11.83□□□□□ -0.52
SF3B3-203ENST00000562874 DBX1A6NMT0 343 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 CLEC3BP05452 202 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 RBMY1DP0C7P1 496 aaKnown RBP11.83□□□□□ -0.52
SF3B3-203ENST00000562874 TRAPPC2P0DI81 140 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 TRAPPC2BP0DI82 140 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 ELK1P19419 428 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 MFAP2P55001 183 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 ZNF585BQ52M93 769 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 UXS1Q8NBZ7 420 aa11.83□□□□□ -0.52
SF3B3-203ENST00000562874 OR2T8A6NH00 312 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 OR11H12B2RN74 326 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 M0QYG6 137 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 APOA1P02647 267 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 SMIM18P0DKX4 95 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 TSPAN5P62079 268 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 FAM106AQ4KMX7 169 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 ZNF57Q68EA5 555 aaPredicted RBP11.82□□□□□ -0.52
SF3B3-203ENST00000562874 SLC25A24Q6NUK1 477 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 CMTM1Q8IZ96 169 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 OR1L8Q8NGR8 309 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
SF3B3-203ENST00000562874 TECRQ9NZ01 308 aaKnown RBP11.82□□□□□ -0.52
SF3B3-203ENST00000562874 OR51B2Q9Y5P1 312 aa11.82□□□□□ -0.52
SF3B3-203ENST00000562874 IGHV3OR16-8A0A075B7F1 116 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 FAM25AB3EWG3 89 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 FAM25CB3EWG5 89 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 FAM25GB3EWG6 89 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 TGOLN2O43493 480 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 SERPINE2P07093 398 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 RCVRNP35243 200 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 THOC7Q6I9Y2 204 aaKnown RBP11.81□□□□□ -0.52
SF3B3-203ENST00000562874 PLET1Q6UQ28 207 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 LINC00322Q6ZN03 302 aaPredicted RBP11.81□□□□□ -0.52
SF3B3-203ENST00000562874 TBC1D26Q86UD7 250 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 LSM10Q969L4 123 aaKnown RBP11.81□□□□□ -0.52
SF3B3-203ENST00000562874 HIPK2Q9H2X6 1198 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 NDUFA4L2Q9NRX3 87 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 F11RQ9Y624 299 aaKnown RBP11.81□□□□□ -0.52
SF3B3-203ENST00000562874 RYR2Q92736 4967 aa11.81□□□□□ -0.52
SF3B3-203ENST00000562874 SMIM31A0A1B0GVY4 71 aa11.8□□□□□ -0.52
SF3B3-203ENST00000562874 C15orf61A6NNL5 157 aa11.8□□□□□ -0.52
SF3B3-203ENST00000562874 SNAPC5O75971 98 aa11.8□□□□□ -0.52
SF3B3-203ENST00000562874 OR52B4Q8NGK2 314 aa11.8□□□□□ -0.52
SF3B3-203ENST00000562874 THYN1Q9P016 225 aa11.8□□□□□ -0.52
SF3B3-203ENST00000562874 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
SF3B3-203ENST00000562874 ZNF207O43670 478 aaKnown RBP11.79□□□□□ -0.52
SF3B3-203ENST00000562874 IGKV1-39P01597 117 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 IGKV1D-39P04432 117 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 IFNA6P05013 189 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 FGF2P09038 288 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 PTBP1P26599 531 aaKnown RBP eCLIP11.79□□□□□ -0.52
SF3B3-203ENST00000562874 SLC16A13Q7RTY0 426 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 TMEM190Q8WZ59 177 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 MRGPRFQ96AM1 343 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 LYSTQ99698 3801 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 SCPEP1Q9HB40 452 aa11.79□□□□□ -0.52
SF3B3-203ENST00000562874 F8W735 103 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-203ENST00000562874 GABARAPO95166 117 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 PI3P19957 117 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 RORCP51449 518 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 PPP5CP53041 499 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 CTF1Q16619 201 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 IZUMO4Q1ZYL8 232 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 SPINK9Q5DT21 86 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 HSD17B13Q7Z5P4 300 aaPredicted RBP11.78□□□□□ -0.52
SF3B3-203ENST00000562874 VN1R17PQ8TDU5 208 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 CMTM3Q96MX0 182 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 CHRDL1Q9BU40 450 aa11.78□□□□□ -0.52
SF3B3-203ENST00000562874 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms