RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 RHOVQ96L33 236 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 AIFM2Q9BRQ8 373 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 MAGT1Q9H0U3 335 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 SH3BGRL3Q9H299 93 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 TMEM231Q9H6L2 316 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 HIF1ANQ9NWT6 349 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 FAM96BQ9Y3D0 163 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 TBL2Q9Y4P3 447 aaKnown RBP6.49□□□□□ -1.37
CPNE6-218ENST00000560845 MINOS1-NBL1R4GNA1 71 aa6.49□□□□□ -1.37
CPNE6-218ENST00000560845 IGHV3-72A0A0B4J1Y9 119 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 C15orf61A6NNL5 157 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 OOSP1A8MZH6 123 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 OR9G9P0C7N8 305 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 SEC11BP0C7V7 166 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 SAA1P0DJI8 122 aaPredicted RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 UBE2E1P51965 193 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 RPS16P62249 146 aaKnown RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 TNFRSF9Q07011 255 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 PRR31Q5SQ13 230 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 LDLRAD2Q5SZI1 272 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 CCDC144NLQ6NUI1 221 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 LHFPL4Q7Z7J7 247 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 OR2C3Q8N628 320 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 OR4C13Q8NGP0 309 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 OR4A16Q8NH70 328 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 FLYWCH2Q96CP2 140 aaKnown RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 TSNAXQ99598 290 aaKnown RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 NKX6-2Q9C056 277 aaPredicted RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 HRH4Q9H3N8 390 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 ZC4H2Q9NQZ6 224 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 LYRM2Q9NU23 88 aaPredicted RBP6.48□□□□□ -1.37
CPNE6-218ENST00000560845 HSPB7Q9UBY9 170 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 CACFD1Q9UGQ2 172 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 RFNGQ9Y644 331 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 PKD1L1Q8TDX9 2849 aa6.48□□□□□ -1.37
CPNE6-218ENST00000560845 TGP01266 2768 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 TRRAPQ9Y4A5 3859 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 TRAV40A0A0B4J280 105 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 TIMM23O14925 209 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 NPFFO15130 113 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 NUPL2O15504 423 aaKnown RBP6.47□□□□□ -1.37
CPNE6-218ENST00000560845 SYNGR2O43760 224 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 H2AFB1P0C5Y9 115 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 IAPPP10997 89 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 GATA3P23771 443 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 SAA4P35542 130 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 NPBWR1P48145 328 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 RPL23AP62750 156 aaKnown RBP6.47□□□□□ -1.37
CPNE6-218ENST00000560845 BLOC1S1P78537 153 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 RELBQ01201 579 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 VMA21Q3ZAQ7 101 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 AARDQ4LEZ3 155 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 AWAT1Q58HT5 328 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 EIF5AL1Q6IS14 154 aaKnown RBP6.47□□□□□ -1.37
CPNE6-218ENST00000560845 TMEM252Q8N6L7 170 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 VSTM2AQ8TAG5 236 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 RBMXL1Q96E39 390 aaKnown RBP6.47□□□□□ -1.37
CPNE6-218ENST00000560845 JMJD8Q96S16 334 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 RAB40CQ96S21 281 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 QTRT1Q9BXR0 403 aaKnown RBP6.47□□□□□ -1.37
CPNE6-218ENST00000560845 SEC11CQ9BY50 192 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 RBKSQ9H477 322 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 UQCC1Q9NVA1 299 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 BET1LQ9NYM9 111 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 PRNDQ9UKY0 176 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 FOXA2Q9Y261 457 aaPredicted RBP6.47□□□□□ -1.37
CPNE6-218ENST00000560845 HILPDAQ9Y5L2 63 aa6.47□□□□□ -1.37
CPNE6-218ENST00000560845 BORCS7-ASMTA0A0B4J1R7 106 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 TRAV3A0A0B4J244 114 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 IGHV1-69DA0A0B4J2H0 117 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 CENPVL3A0A0U1RRI6 287 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 SRRM4A7MD48 611 aaKnown RBP6.46□□□□□ -1.38
CPNE6-218ENST00000560845 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 J3QLI3 93 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 UPK2O00526 184 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 CHST1O43916 411 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 KBTBD11O94819 623 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 IFNA17P01571 189 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 IGHV1-69P01742 117 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 ATP6V0CP27449 155 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 CD1BP29016 333 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 LGALS7P47929 136 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 HOXA1P49639 335 aaPredicted RBP6.46□□□□□ -1.38
CPNE6-218ENST00000560845 FHITP49789 147 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 F2RL1P55085 397 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 UBE2KP61086 200 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 DEFA5Q01523 94 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 HABP2Q14520 560 aaPredicted RBP6.46□□□□□ -1.38
CPNE6-218ENST00000560845 SSX2Q16385 188 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 PDLIM3Q53GG5 364 aaPredicted RBP6.46□□□□□ -1.38
CPNE6-218ENST00000560845 HAPLN4Q86UW8 402 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 ZNF429Q86V71 674 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 TEX29Q8N6K0 151 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 OR52E5Q8NH55 327 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 OR4A5Q8NH83 315 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 DTD1Q8TEA8 209 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 CFHR4Q92496 578 aa6.46□□□□□ -1.38
CPNE6-218ENST00000560845 NARS2Q96I59 477 aaKnown RBP6.46□□□□□ -1.38
CPNE6-218ENST00000560845 CLCC1Q96S66 551 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms