RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 IGKV1-33P01594 117 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 FGF7P21781 194 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 CCL20P78556 96 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 PRCDQ00LT1 54 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 BTNL8Q6UX41 500 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 BPIFCQ8NFQ6 507 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 TAF15Q92804 592 aaKnown RBP eCLIP8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 UQCC1Q9NVA1 299 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 A8MXK9 166 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 ODF3BA8MYP8 253 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 NPY1RP25929 384 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 LGALS4P56470 323 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 TNXAQ16473 311 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 AKR1C8PQ5T2L2 129 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 SSX7Q7RTT5 188 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 LRRC20Q8TCA0 184 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 MED9Q9NWA0 146 aa8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 METTL1Q9UBP6 276 aaKnown RBP8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 AMMECR1Q9Y4X0 333 aaPredicted RBP8.73□□□□□ -1.01
SNRPA1-211ENST00000560433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.73□□□□□ -1.013e-8■■■■■ 46.1
SNRPA1-211ENST00000560433 VENTXO95231 258 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 USF1P22415 310 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 CD1BP29016 333 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 DVL1P1P54792 670 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 WT1-ASQ06250 92 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 PLGLAQ15195 96 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 PSG5Q15238 335 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 MMDQ15546 238 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 VMA21Q3ZAQ7 101 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 PDLIM3Q53GG5 364 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 HSD17B13Q7Z5P4 300 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 TMEM167AQ8TBQ9 72 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 PINX1Q96BK5 328 aaKnown RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 GNPNAT1Q96EK6 184 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 SAT2Q96F10 170 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 PARP11Q9NR21 331 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 NDUFA4L2Q9NRX3 87 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 RPRMQ9NS64 109 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 CSPG4Q6UVK1 2322 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 TSPAN15O95858 294 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 FGF8P55075 233 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 BLOC1S1P78537 153 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 ARSJQ5FYB0 599 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 RUSC1-AS1Q66K80 236 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 SFT2D1Q8WV19 159 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 TMEM147Q9BVK8 224 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 TREM1Q9NP99 234 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 SOX21Q9Y651 276 aaPredicted RBP8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 KPTNQ9Y664 436 aa8.72□□□□□ -1.01
SNRPA1-211ENST00000560433 C9JQL5 133 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 PRSS46E5RG02 174 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 SNRNP70P08621 437 aaKnown RBP8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 SNCAP37840 140 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 RAB2AP61019 212 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 ACSM6Q6P461 480 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 TREML4Q6UXN2 200 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 BRD3OSQ6XYD6 125 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 OR5B3Q8NH48 314 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 VSTM2AQ8TAG5 236 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 CFHR4Q92496 578 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 AIFM2Q9BRQ8 373 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 FAM103A1Q9BTL3 118 aaKnown RBP8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 NPCDR1Q9BY65 106 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 ZNF257Q9Y2Q1 563 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 SIGLEC9Q9Y336 463 aa8.71□□□□□ -1.01
SNRPA1-211ENST00000560433 IGHV3-21A0A0B4J1V1 117 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 VWC2LB2RUY7 222 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 FOXH1O75593 365 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 OR13C7P0DN81 318 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 LGALS7P47929 136 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 RAB11AP62491 216 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 RPP30P78346 268 aaKnown RBP8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 FAM120AOSQ5T036 256 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 LCN15Q6UWW0 184 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 PIP4P2Q8N4L2 257 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 OR1L8Q8NGR8 309 aa8.71□□□□□ -1.02
SNRPA1-211ENST00000560433 ACTL6BO94805 426 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 APOC3P02656 99 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 AREGP15514 252 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 SAA4P35542 130 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 ZNF726P1Q15940 193 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 CLEC12BQ2HXU8 276 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 PPP1R27Q86WC6 154 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 SSMEM1Q8WWF3 244 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 C1orf159Q96HA4 380 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 RARRES2Q99969 163 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 FKBP11Q9NYL4 201 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 GCN1Q92616 2671 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 NCBP2LA6PVI3 153 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 GOSR1O95249 250 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 RNASE2P10153 161 aaKnown RBP8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 PLA2G2AP14555 144 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 ADCYAP1P18509 176 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 CEACAM3P40198 252 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 SSBP2P81877 361 aaPredicted RBP8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 PRSS8Q16651 343 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 C1orf122Q6ZSJ8 110 aa8.7□□□□□ -1.02
SNRPA1-211ENST00000560433 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms