RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 OR5R1Q8NH85 324 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 DTD1Q8TEA8 209 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 C17orf50Q8WW18 174 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 SMIM8Q96KF7 97 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 RASL11BQ9BPW5 248 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 RNF126Q9BV68 326 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 HINT2Q9BX68 163 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 QTRT1Q9BXR0 403 aaKnown RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 MFFQ9GZY8 342 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 MAGT1Q9H0U3 335 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 RBKSQ9H477 322 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 ZNF430Q9H8G1 570 aaPredicted RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 PLEKHA3Q9HB20 300 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 HEYLQ9NQ87 328 aaPredicted RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 PSENENQ9NZ42 101 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 RCL1Q9Y2P8 373 aaKnown RBP5.15□□□□□ -1.59
SPG11-221ENST00000560299 U3KQ87 197 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 STAB1Q9NY15 2570 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 SVEP1Q4LDE5 3571 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 TNCP24821 2201 aa5.15□□□□□ -1.59
SPG11-221ENST00000560299 TRAV3A0A0B4J244 114 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 TEX50A0A1B0GTY4 177 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 KANTRA0A1W2PQU2 76 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 TAAR5O14804 337 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 FGF16O43320 207 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 TSPAN9O75954 239 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 NXPH3O95157 252 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 IFNA10P01566 189 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 CRYGBP07316 175 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 CD24P25063 80 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 RPL12P30050 165 aaKnown RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 SNCAP37840 140 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 RPL27AP46776 148 aaKnown RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 HOXA1P49639 335 aaPredicted RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 COMPP49747 757 aaPredicted RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 RAB11AP62491 216 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 HBG1P69891 147 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 HBG2P69892 147 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 PRCDQ00LT1 54 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 BAXQ07812 192 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 ZNF345Q14585 488 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 TNXAQ16473 311 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 SPANXN5Q5MJ07 72 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 FAM120AOSQ5T036 256 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 ZNF562Q6V9R5 426 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 LINC00528Q8N1L1 170 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 OR2C3Q8N628 320 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 OR11H4Q8NGC9 324 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 SSMEM1Q8WWF3 244 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 RBM14Q96PK6 669 aaKnown RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 SRSF8Q9BRL6 282 aaKnown RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 SLC25A33Q9BSK2 321 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 FBXL15Q9H469 300 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 GSX1Q9H4S2 264 aaPredicted RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 LYRM2Q9NU23 88 aaPredicted RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 OR5AC2Q9NZP5 309 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 TNFSF18Q9UNG2 199 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 TCF19Q9Y242 345 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 MOB4Q9Y3A3 225 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 STRAPQ9Y3F4 350 aaKnown RBP5.14□□□□□ -1.59
SPG11-221ENST00000560299 HSPB11Q9Y547 144 aa5.14□□□□□ -1.59
SPG11-221ENST00000560299 INS-IGF2F8WCM5 200 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 G3V3Q6 166 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 H0YIZ8 118 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 H3BUX3 64 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 CLDN34H7C241 214 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 CYB5BO43169 146 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 IAPPP10997 89 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 PAX6P26367 422 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 CNTFRP26992 372 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 S100A11P31949 105 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 HTR2BP41595 481 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 NKX2-5P52952 324 aaPredicted RBP5.13□□□□□ -1.59
SPG11-221ENST00000560299 RPL15P61313 204 aaKnown RBP5.13□□□□□ -1.59
SPG11-221ENST00000560299 GNB1P62873 340 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 EIF5AP63241 154 aaKnown RBP5.13□□□□□ -1.59
SPG11-221ENST00000560299 TMEM267Q0VDI3 215 aaPredicted RBP5.13□□□□□ -1.59
SPG11-221ENST00000560299 DEFB112Q30KQ8 113 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 Q6YL49 198 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 KCNRGQ8N5I3 272 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 Q8N6K4 173 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 OR10P1Q8NGE3 313 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 GRPEL2Q8TAA5 225 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 RITA1Q96K30 269 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 AQP10Q96PS8 301 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 SMR3AQ99954 134 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 ARL6Q9H0F7 186 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 NDUFA4L2Q9NRX3 87 aa5.13□□□□□ -1.59
SPG11-221ENST00000560299 PAIP2BQ9ULR5 123 aaKnown RBP5.13□□□□□ -1.59
SPG11-221ENST00000560299 BORCS7-ASMTA0A0B4J1R7 106 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 A6NDX4 124 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 FAM24AA6NFZ4 105 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 INAFM1C9JVW0 142 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 KCNAB3O43448 404 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 DFFBO76075 338 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 CA2P00918 260 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 HLA-DRB1P01911 266 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 OPN1MWP04001 364 aa5.12□□□□□ -1.59
SPG11-221ENST00000560299 IFNA4P05014 189 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms