RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 A0A1B0GU03 582 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 PRAF2O60831 178 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 IFNA21P01568 189 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 H2AFB2P0C5Z0 115 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 SULT1A3P0DMM9 295 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 SULT1A4P0DMN0 295 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 RPL23AP62750 156 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 ERHP84090 104 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 RUNX1Q01196 453 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 KLK9Q2XQG4 91 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 PLET1Q6UQ28 207 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 LYG2Q86SG7 212 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 FYTTD1Q96QD9 318 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 FAM103A1Q9BTL3 118 aaKnown RBP9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 GPN1Q9HCN4 374 aaPredicted RBP9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 ZNF355PQ9NSJ1 428 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 NUDT15Q9NV35 164 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 KLK9Q9UKQ9 250 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 TBC1D24Q9ULP9 559 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 FBXO7Q9Y3I1 522 aa9.43□□□□□ -0.9
RABGGTA-215ENST00000560207 C9orf170A2RU37 121 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 TEX22C9J3V5 150 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 IGKV1-5P01602 117 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 DEFA4P12838 97 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 PSMB6P28072 239 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 KRTAP10-3P60369 221 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 SPCS3P61009 180 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 PRCDQ00LT1 54 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 DHRS2Q13268 280 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 PPP1R1AQ13522 171 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 PDLIM3Q53GG5 364 aaPredicted RBP9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 KHDC1LQ5JSQ8 128 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 PRR31Q5SQ13 230 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 NOXA1Q86UR1 476 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 SLC35G3Q8N808 338 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 C4orf3Q8WVX3 66 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 ATP6V0BQ99437 205 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 ENY2Q9NPA8 101 aa9.42□□□□□ -0.9
RABGGTA-215ENST00000560207 TRAV3A0A0B4J244 114 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 C13orf42A0A1B0GVH6 325 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 NUDT19A8MXV4 375 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 FAM90A26D6RGX4 464 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 PTTG1O95997 202 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 IFNA17P01571 189 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 TRGV3P03979 118 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 IL5P05113 134 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 RPLP1P05386 114 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 CTRB1P17538 263 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 TPPP2P59282 170 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 SMCO1Q147U7 214 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 TCTEX1D4Q5JR98 221 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 CTRB2Q6GPI1 263 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 ZNF491Q8N8L2 437 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 OR5T1Q8NG75 326 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 MITD1Q8WV92 249 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 RBMXL1Q96E39 390 aaKnown RBP9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 PLEKHA3Q9HB20 300 aa9.41□□□□□ -0.9
RABGGTA-215ENST00000560207 TRBV9A0A0B4J1U6 114 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 A0A0B4J293 547 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 IGLC7A0M8Q6 106 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 CORTO00230 105 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 SOX15O60248 233 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 MED6O75586 246 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 SNCAP37840 140 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 MYCNOSP40205 109 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 NMSQ5H8A3 153 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 ASPHD1Q5U4P2 390 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 C11orf44Q8N8P7 122 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 ZNF114Q8NC26 417 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 KLHL30-AS1Q8NEE0 82 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 LHFPL5Q8TAF8 219 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 CASTOR1Q8WTX7 329 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 CXorf58Q96LI9 332 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 HINT2Q9BX68 163 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 HIPK2Q9H2X6 1198 aa9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 GAR1Q9NY12 217 aaKnown RBP9.4□□□□□ -0.9
RABGGTA-215ENST00000560207 TRAV6A0A075B6T7 132 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 SNRPGP15A8MWD9 76 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 LGALS1P09382 135 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 OR13C7P0DN81 318 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 IFITM3Q01628 133 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 DCTN2Q13561 401 aaKnown RBP9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 NSUN5P1Q3KNT7 163 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 C10orf55Q5SWW7 151 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 C10orf99Q6UWK7 81 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 LYZL2Q7Z4W2 148 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 OR1P1Q8NH06 330 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 GPR146Q96CH1 333 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 CIB3Q96Q77 187 aaPredicted RBP9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 MARVELD1Q9BSK0 173 aa9.39□□□□□ -0.91
RABGGTA-215ENST00000560207 GPR61Q9BZJ8 451 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms