RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 RARRES2Q99969 163 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 NABP2Q9BQ15 211 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 HSPB1P04792 205 aaKnown RBP14.42□□□□□ -0.1
SNX1-208ENST00000559844 KHDC3LQ587J8 217 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 WFDC11Q8NEX6 87 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 SLC24A4Q8NFF2 622 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 OR4A5Q8NH83 315 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 C8orf46Q8TAG6 207 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 LHX4Q969G2 390 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 FLYWCH2Q96CP2 140 aaKnown RBP14.42□□□□□ -0.1
SNX1-208ENST00000559844 HARBI1Q96MB7 349 aa14.42□□□□□ -0.1
SNX1-208ENST00000559844 RRHO14718 337 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 NUPL2O15504 423 aaKnown RBP14.41□□□□□ -0.1
SNX1-208ENST00000559844 SAA1P0DJI8 122 aaPredicted RBP14.41□□□□□ -0.1
SNX1-208ENST00000559844 MC5RP33032 325 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 RAB13P51153 203 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 PRRX1P54821 245 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 ATP5IP56385 69 aaPredicted RBP14.41□□□□□ -0.1
SNX1-208ENST00000559844 PRCDQ00LT1 54 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 ZNF726P1Q15940 193 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 HAGHQ16775 308 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 TGIF2LXQ8IUE1 241 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 C11orf42Q8N5U0 333 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 OR4C13Q8NGP0 309 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 OR5B3Q8NH48 314 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 VSTM2AQ8TAG5 236 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 PLEKHA3Q9HB20 300 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 WASHC3Q9Y3C0 194 aa14.41□□□□□ -0.1
SNX1-208ENST00000559844 YLPM1P49750 1951 aaKnown RBP14.41□□□□□ -0.1
SNX1-208ENST00000559844 SRRM4A7MD48 611 aaKnown RBP14.4□□□□□ -0.1
SNX1-208ENST00000559844 PRSS46E5RG02 174 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 IFNA4P05014 189 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 SLC25A16P16260 332 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 NPY1RP25929 384 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 ICAM4Q14773 271 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 FFAR4Q5NUL3 377 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 ACSM6Q6P461 480 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 LCN15Q6UWW0 184 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 SLC39A9Q9NUM3 307 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 MED13LQ71F56 2210 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 LOC102723971A0A1B0GUV8 181 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 hCG_1809904A0A1W2PP81 198 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 A0A1W2PPE2 198 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 A0A1W2PR64 198 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 A0A1W2PRV1 198 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 MAP1LC3B2A6NCE7 125 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 IFNA1P01562 189 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 MAP1LC3BQ9GZQ8 125 aa14.4□□□□□ -0.1
SNX1-208ENST00000559844 ITPR3Q14573 2671 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 PPIAL4CA0A0B4J2A2 164 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 IGHV4-61A0A0C4DH41 118 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 CTXND1A0A1B0GTU2 59 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 SRP19P09132 144 aaKnown RBP14.39□□□□□ -0.11
SNX1-208ENST00000559844 PPIAL4GP0DN37 164 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 OR13C7P0DN81 318 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 REG1BP48304 166 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 PMS2P11Q13670 270 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 ACOT6Q3I5F7 207 aaPredicted RBP14.39□□□□□ -0.11
SNX1-208ENST00000559844 SOHLH1Q5JUK2 328 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 WDR25Q64LD2 544 aaPredicted RBP14.39□□□□□ -0.11
SNX1-208ENST00000559844 OR10G4Q8NGN3 311 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 OR10G9Q8NGN4 311 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 OR10G7Q8NGN6 311 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 ACTR3CQ9C0K3 210 aaPredicted RBP14.39□□□□□ -0.11
SNX1-208ENST00000559844 CR1P17927 2039 aa14.39□□□□□ -0.11
SNX1-208ENST00000559844 SMCO3A2RU48 225 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 USF1P22415 310 aaPredicted RBP14.38□□□□□ -0.11
SNX1-208ENST00000559844 TMEM170AQ8WVE7 144 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 GNG13Q9P2W3 67 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 IGHV2-26A0A0B4J1V2 119 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 TEX50A0A1B0GTY4 177 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 CYSRT1A8MQ03 144 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 RNF223E7ERA6 249 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 CYB5BO43169 146 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 SSX7Q7RTT5 188 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 RPP25LQ8N5L8 163 aaKnown RBP14.38□□□□□ -0.11
SNX1-208ENST00000559844 TMEM167AQ8TBQ9 72 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 RXFP4Q8TDU9 374 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 HINT2Q9BX68 163 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 CLEC7AQ9BXN2 247 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 KCNIP2Q9NS61 270 aa14.38□□□□□ -0.11
SNX1-208ENST00000559844 FNDC10F2Z333 226 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 CA2P00918 260 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 IGKV1D-33P01593 117 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 IGKV1-33P01594 117 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 BCL2P10415 239 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 HNF4GQ14541 408 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 TREML4Q6UXN2 200 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 BEND2Q8NDZ0 799 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 PATZ1Q9HBE1 687 aaKnown RBP14.37□□□□□ -0.11
SNX1-208ENST00000559844 NPVFQ9HCQ7 196 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 MALRD1Q5VYJ5 2156 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 ABCA2Q9BZC7 2435 aa14.37□□□□□ -0.11
SNX1-208ENST00000559844 CREBBPQ92793 2442 aa14.36□□□□□ -0.11
SNX1-208ENST00000559844 LIPFP07098 398 aa14.36□□□□□ -0.11
SNX1-208ENST00000559844 OPRK1P41145 380 aa14.36□□□□□ -0.11
SNX1-208ENST00000559844 RPL8P62917 257 aaKnown RBP14.36□□□□□ -0.11
SNX1-208ENST00000559844 DIAPH2-AS1Q14236 149 aa14.36□□□□□ -0.11
SNX1-208ENST00000559844 HLA-DRB5Q30154 266 aa14.36□□□□□ -0.11
SNX1-208ENST00000559844 VMA21Q3ZAQ7 101 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms