RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 H2BFWTQ7Z2G1 175 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 TMEM229BQ8NBD8 167 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 OR4D10Q8NGI6 311 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 OR4A16Q8NH70 328 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 MCFD2Q8NI22 146 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 RNASE11Q8TAA1 199 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 LSM10Q969L4 123 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 MRGPRFQ96AM1 343 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 ISOC1Q96CN7 298 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 FANCD2OSQ96PS1 177 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 ZC4H2Q9NQZ6 224 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 THYN1Q9P016 225 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 COPZ2Q9P299 210 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 PRNDQ9UKY0 176 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 LSM4Q9Y4Z0 139 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 SORL1Q92673 2214 aa6.26□□□□□ -1.41
SNX1-207ENST00000559401 PRKDCP78527 4128 aaKnown RBP6.26□□□□□ -1.41
SNX1-207ENST00000559401 IGLV11-55A0A075B6I3 123 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 MFSD2BA6NFX1 497 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 DISC1C4P0D8 188 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 H0Y980 276 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 OR2C1O95371 312 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 FGF2P09038 288 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 GPR183P32249 361 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 PIGPP57054 158 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 MEF2DQ14814 521 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 TRIM16LQ309B1 348 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 HSD17B13Q7Z5P4 300 aaPredicted RBP6.25□□□□□ -1.41
SNX1-207ENST00000559401 LHFPL1Q86WI0 220 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 SGPP2Q8IWX5 399 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 GDPD1Q8N9F7 314 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 CCDC71LQ8N9Z2 235 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 ZFAND1Q8TCF1 268 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 MARCH1Q8TCQ1 289 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 SMIM4Q8WVI0 70 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 ZNF486Q96H40 463 aaPredicted RBP6.25□□□□□ -1.41
SNX1-207ENST00000559401 CXorf58Q96LI9 332 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 CCDC140Q96MF4 163 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 TMEM56Q96MV1 263 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 SRSF8Q9BRL6 282 aaKnown RBP6.25□□□□□ -1.41
SNX1-207ENST00000559401 FKBP11Q9NYL4 201 aa6.25□□□□□ -1.41
SNX1-207ENST00000559401 C14orf166Q9Y224 244 aaKnown RBP6.25□□□□□ -1.41
SNX1-207ENST00000559401 TRBV7-1A0A0A6YYK4 115 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 IGHV3-21A0A0B4J1V1 117 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 TEX13DA0A0J9YY54 714 aaPredicted RBP6.24□□□□□ -1.41
SNX1-207ENST00000559401 C3orf85A0A1B0GTC6 90 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 C15orf61A6NNL5 157 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 ATG12O94817 140 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 IGKV1-39P01597 117 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 CD74P04233 296 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 IGKV1D-39P04432 117 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 CSN3P07498 182 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 AKAIN1P0CW23 69 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 RND3P61587 244 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 SSBP1Q04837 148 aaKnown RBP6.24□□□□□ -1.41
SNX1-207ENST00000559401 WT1-ASQ06250 92 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 FAM106AQ4KMX7 169 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 LCN12Q6JVE5 192 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 UBAC2Q8NBM4 344 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 OR13C8Q8NGS7 320 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 OR5B3Q8NH48 314 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 TERB2Q8NHR7 220 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 SEC22AQ96IW7 307 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 TP53RKQ96S44 253 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 NDUFA4L2Q9NRX3 87 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 FAM212BQ9NTI7 297 aaPredicted RBP6.24□□□□□ -1.41
SNX1-207ENST00000559401 RABL2AQ9UBK7 228 aaPredicted RBP6.24□□□□□ -1.41
SNX1-207ENST00000559401 RSL24D1Q9UHA3 163 aaKnown RBP6.24□□□□□ -1.41
SNX1-207ENST00000559401 RABL2BQ9UNT1 228 aa6.24□□□□□ -1.41
SNX1-207ENST00000559401 IGHV3-35A0A0C4DH35 117 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 FABP12A6NFH5 140 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 C2orf70A6NJV1 201 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 DBX1A6NMT0 343 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 CLEC3BP05452 202 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 CTSDP07339 412 aaPredicted RBP6.23□□□□□ -1.41
SNX1-207ENST00000559401 FRMD6-AS1P0C7T7 363 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 NHLRC4P0CG21 123 aaPredicted RBP6.23□□□□□ -1.41
SNX1-207ENST00000559401 FOLR2P14207 255 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 EDN2P20800 178 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 PTBP1P26599 531 aaKnown RBP eCLIP6.23□□□□□ -1.41
SNX1-207ENST00000559401 S100A5P33763 92 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 GUCA2BQ16661 112 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 IZUMO4Q1ZYL8 232 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 SP6Q3SY56 376 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 Q56UQ5 140 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 SPINK9Q5DT21 86 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 PLET1Q6UQ28 207 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 IL34Q6ZMJ4 242 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 GTSCR1Q86UQ5 136 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 Q8N402 240 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 SLC35G3Q8N808 338 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 OR4C16Q8NGL9 310 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 RRNAD1Q96FB5 475 aaKnown RBP6.23□□□□□ -1.41
SNX1-207ENST00000559401 MISP3Q96FF7 219 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 PDCD10Q9BUL8 212 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 SLIRPQ9GZT3 109 aaKnown RBP6.23□□□□□ -1.41
SNX1-207ENST00000559401 PLEKHA3Q9HB20 300 aa6.23□□□□□ -1.41
SNX1-207ENST00000559401 TMEM14BQ9NUH8 114 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms