RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 BSXQ3C1V8 233 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 C9orf152Q5JTZ5 239 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 OR1L8Q8NGR8 309 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 MYOZ3Q8TDC0 251 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 SPIN2AQ99865 258 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 SPIN2BQ9BPZ2 258 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 COMMD5Q9GZQ3 224 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
SNRPA1-207ENST00000559309 TRAV41A0A0B4J266 112 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 NPIPB5A8MRT5 1133 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 G3V318 75 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 TRAPPC2P0DI81 140 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 TRAPPC2BP0DI82 140 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 CTRB1P17538 263 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 KRTAP10-3P60369 221 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 SPCS3P61009 180 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 WT1-ASQ06250 92 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 CTRB2Q6GPI1 263 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 HSD17B13Q7Z5P4 300 aaPredicted RBP11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 LFNGQ8NES3 379 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 OR5M8Q8NGP6 311 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 C19orf24Q9BVV8 132 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 PARP11Q9NR21 331 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 RNF114Q9Y508 228 aa11.59□□□□□ -0.55
SNRPA1-207ENST00000559309 ACTL6BO94805 426 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 CNIH1O95406 144 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 PSMB8P28062 276 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 GNB1P62873 340 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 TNFRSF9Q07011 255 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 TMEM267Q0VDI3 215 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 KIAA0141Q14154 515 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 C10orf99Q6UWK7 81 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 ZBTB8BQ8NAP8 495 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 ZNF114Q8NC26 417 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 OR10W1Q8NGF6 305 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 LINC00527Q9UJ94 153 aa11.58□□□□□ -0.56
SNRPA1-207ENST00000559309 TRBV9A0A0B4J1U6 114 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 HMX3A6NHT5 357 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 H3BUA1 57 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 CCSO14618 274 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 IFNA21P01568 189 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 AREGP15514 252 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 H2BFSP57053 126 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 OR2C3Q8N628 320 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 KLHDC1Q8N7A1 406 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 GRPEL2Q8TAA5 225 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 WFDC12Q8WWY7 111 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 FYTTD1Q96QD9 318 aaKnown RBP11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 GON7Q9BXV9 100 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 C11orf1Q9H5F2 150 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 DMRT1Q9Y5R6 373 aa11.57□□□□□ -0.56
SNRPA1-207ENST00000559309 FBXO24O75426 580 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 OPN1MWP04001 364 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 OPN1MW2P0DN77 364 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 OPN1MW3P0DN78 364 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 PSMB6P28072 239 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 IAH1Q2TAA2 248 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 CXorf66Q5JRM2 361 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 UNQ5815/PRO19632Q6UWF5 114 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 COMMD1Q8N668 190 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 RNASE11Q8TAA1 199 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 C2orf50Q96LR7 162 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 FANCD2OSQ96PS1 177 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 WSB1Q9Y6I7 421 aa11.56□□□□□ -0.56
SNRPA1-207ENST00000559309 A0A1W2PN81 502 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 PSMB11A5LHX3 300 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 RBMXL2O75526 392 aaKnown RBP11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 ELANEP08246 267 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 CXCL3P19876 107 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 CHRNA7P36544 502 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 MFAP2P55001 183 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 CD83Q01151 205 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 FOXE3Q13461 319 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 OR11H7Q8NGC8 314 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 TMEM170AQ8WVE7 144 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 NMES1Q9C002 83 aa11.55□□□□□ -0.56
SNRPA1-207ENST00000559309 IGLV11-55A0A075B6I3 123 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 RRAS2P62070 204 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 ECSCRQ19T08 205 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 TEX38Q6PEX7 206 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 OR1S1Q8NH92 325 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 CHAC2Q8WUX2 184 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 CITED1Q99966 193 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 RBKSQ9H477 322 aa11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 F11RQ9Y624 299 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-207ENST00000559309 ADARB2-AS1A8MUL3 147 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 GOSR2O14653 212 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 SYNGR2O43760 224 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 SSNA1O43805 119 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 TMEM50AO95807 157 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 IFNA17P01571 189 aa11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 RNASE2P10153 161 aaKnown RBP11.53□□□□□ -0.56
SNRPA1-207ENST00000559309 PAX9P55771 341 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms