RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 IL22RA2Q969J5 263 aa8.46□□□□□ -1.06
TPM1-217ENST00000559108 FANCD2OSQ96PS1 177 aa8.46□□□□□ -1.06
TPM1-217ENST00000559108 DUX3Q96PT4 197 aa8.46□□□□□ -1.06
TPM1-217ENST00000559108 PKD1L1Q8TDX9 2849 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 A0A0B4J2A0 478 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 TCRBV4S1A1TA0A5B7 111 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 ELANEP08246 267 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 FGF2P09038 288 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 CTRB1P17538 263 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 PSMB6P28072 239 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 RAB9AP51151 201 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 C2orf68Q2NKX9 166 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 CTRB2Q6GPI1 263 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 MZT2BQ6NZ67 158 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 TEX38Q6PEX7 206 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 C8orf86Q6ZUL3 223 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 ZNF429Q86V71 674 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 LGI3Q8N145 548 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 TTC9CQ8N5M4 171 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 ZNF491Q8N8L2 437 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 OR4X2Q8NGF9 303 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 LSM10Q969L4 123 aaKnown RBP8.45□□□□□ -1.06
TPM1-217ENST00000559108 OR5B12Q96R08 314 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 PHB2Q99623 299 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 HINT2Q9BX68 163 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 COMMD5Q9GZQ3 224 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 SHPKQ9UHJ6 478 aa8.45□□□□□ -1.06
TPM1-217ENST00000559108 CMYA5Q8N3K9 4069 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 TRBV9A0A0B4J1U6 114 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 NPIPB5A8MRT5 1133 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 CREBL2O60519 120 aaPredicted RBP8.44□□□□□ -1.06
TPM1-217ENST00000559108 PITX3O75364 302 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 SNAPC5O75971 98 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 ACTL6BO94805 426 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 DUS4LO95620 317 aaKnown RBP8.44□□□□□ -1.06
TPM1-217ENST00000559108 TRBV12-3P01733 135 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 IGHV3-11P01762 117 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 CRYGCP07315 174 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 HOXB5P09067 269 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 TRAPPC2P0DI81 140 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 TRAPPC2BP0DI82 140 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 SLC35B1P78383 322 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 PRCDQ00LT1 54 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 C4orf46Q504U0 113 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 GGNBP1Q5YKI7 109 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 NDUFA11Q86Y39 141 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 OR5M8Q8NGP6 311 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 OR1L8Q8NGR8 309 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 ENKURQ8TC29 256 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 TMEM170AQ8WVE7 144 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 SPIN2AQ99865 258 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 SPIN2BQ9BPZ2 258 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 AIFM2Q9BRQ8 373 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 COA4Q9NYJ1 87 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 KLK9Q9UKQ9 250 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 PRNDQ9UKY0 176 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 KCNIP3Q9Y2W7 256 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 TSSC4Q9Y5U2 329 aaPredicted RBP8.44□□□□□ -1.06
TPM1-217ENST00000559108 S4R3C0 116 aa8.44□□□□□ -1.06
TPM1-217ENST00000559108 IGLV11-55A0A075B6I3 123 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 CCSO14618 274 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 NDUFB8O95169 186 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 BRI3O95415 125 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 TRGV3P03979 118 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 OR13C7P0DN81 318 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 TPPP2P59282 170 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 HSPE1P61604 102 aaKnown RBP8.43□□□□□ -1.06
TPM1-217ENST00000559108 TMEM267Q0VDI3 215 aaPredicted RBP8.43□□□□□ -1.06
TPM1-217ENST00000559108 CXorf66Q5JRM2 361 aaPredicted RBP8.43□□□□□ -1.06
TPM1-217ENST00000559108 COMMD1Q8N668 190 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 KLHL30-AS1Q8NEE0 82 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 OR5B3Q8NH48 314 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 OR4A16Q8NH70 328 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 ZNF431Q8TF32 576 aaPredicted RBP8.43□□□□□ -1.06
TPM1-217ENST00000559108 MITD1Q8WV92 249 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 RRNAD1Q96FB5 475 aaKnown RBP8.43□□□□□ -1.06
TPM1-217ENST00000559108 WDR89Q96FK6 387 aaPredicted RBP8.43□□□□□ -1.06
TPM1-217ENST00000559108 ZNF414Q96IQ9 312 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 RAX2Q96IS3 184 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 OR10C1Q96KK4 312 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 MARVELD1Q9BSK0 173 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 ZNF257Q9Y2Q1 563 aa8.43□□□□□ -1.06
TPM1-217ENST00000559108 MFSD2BA6NFX1 497 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 I3L521 148 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 OR2J3O76001 311 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 IL5P05113 134 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 ANXA3P12429 323 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 CDX1P47902 265 aaPredicted RBP8.42□□□□□ -1.06
TPM1-217ENST00000559108 RHOGP84095 191 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 PDLIM3Q53GG5 364 aaPredicted RBP8.42□□□□□ -1.06
TPM1-217ENST00000559108 OR2C3Q8N628 320 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 RNASE11Q8TAA1 199 aaKnown RBP8.42□□□□□ -1.06
TPM1-217ENST00000559108 P2RX4Q99571 388 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 GON7Q9BXV9 100 aa8.42□□□□□ -1.06
TPM1-217ENST00000559108 IGHV4OR15-8A0A075B7B6 117 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 A0A087WW49 117 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 DUXBA0A1W2PPF3 345 aa8.41□□□□□ -1.06
TPM1-217ENST00000559108 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms