RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 DEFA4P12838 97 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 GALP22466 123 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 FGF9P31371 208 aaPredicted RBP5.55□□□□□ -1.52
SPG11-213ENST00000558988 FCGR2CP31995 323 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 TGFBR1P36897 503 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 IL34Q6ZMJ4 242 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 Q6ZS49 121 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 TPRA1Q86W33 373 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 FAM223AQ8IWN6 122 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 BEST4Q8NFU0 473 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 OR13F1Q8NGS4 319 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 OR51H1Q8NH63 302 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 CACNG8Q8WXS5 425 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 ISOC1Q96CN7 298 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 SLC25A38Q96DW6 304 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 OR2A7Q96R45 310 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 HSD17B10Q99714 261 aaKnown RBP5.55□□□□□ -1.52
SPG11-213ENST00000558988 CENPOQ9BU64 300 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 SLC5A7Q9GZV3 580 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 WFDC10AQ9H1F0 79 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 DCSTAMPQ9H295 470 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 IFT46Q9NQC8 304 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 TMEM140Q9NV12 185 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 NBEAL2Q6ZNJ1 2754 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 IGHV3-35A0A0C4DH35 117 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 SULT1C2O00338 296 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 MRPS14O60783 128 aaKnown RBP5.54□□□□□ -1.52
SPG11-213ENST00000558988 SCGNO76038 276 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 SLC22A5O76082 557 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 TPPPO94811 219 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 NDUFB8O95169 186 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 IL6RP08887 468 aaPredicted RBP5.54□□□□□ -1.52
SPG11-213ENST00000558988 ARL3P36405 182 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 LSM3P62310 102 aaKnown RBP5.54□□□□□ -1.52
SPG11-213ENST00000558988 PMS2P11Q13670 270 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 HAGHQ16775 308 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 CD300EQ496F6 205 aaPredicted RBP5.54□□□□□ -1.52
SPG11-213ENST00000558988 AADACL3Q5VUY0 350 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 ZNF773Q6PK81 442 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 CLEC19AQ6UXS0 136 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 ADAMTSL5Q6ZMM2 481 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 SLC25A42Q86VD7 318 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 SPAG16Q8N0X2 631 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 Q8N402 240 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 NECAP1Q8NC96 275 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 VSTM2AQ8TAG5 236 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 HINT2Q9BX68 163 aa5.54□□□□□ -1.52
SPG11-213ENST00000558988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.53□□□□□ -1.52
SPG11-213ENST00000558988 TRBV9A0A0B4J1U6 114 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 A0A1B0GW64 132 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 TEX22C9J3V5 150 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 E7EUB6 86 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 HRASP01112 189 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 PPYP01298 95 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 IFNA6P05013 189 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 CD7P09564 240 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 FOLR2P14207 255 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 HERV-K104P61576 105 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 RPL8P62917 257 aaKnown RBP5.53□□□□□ -1.52
SPG11-213ENST00000558988 CATR1Q13166 79 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 OR4A47Q6IF82 309 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 ZNF66Q6ZN08 573 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 TTC9CQ8N5M4 171 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 DEFB125Q8N687 156 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 DMBX1Q8NFW5 382 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 TMEM167AQ8TBQ9 72 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 EEF1AKMT3Q96AZ1 226 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 NEURL2Q9BR09 285 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 SRD5A3Q9H8P0 318 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 DIABLOQ9NR28 239 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 SLC2A8Q9NY64 477 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 EHFQ9NZC4 300 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 ZNF257Q9Y2Q1 563 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 ETV7Q9Y603 341 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 CEPT1Q9Y6K0 416 aa5.53□□□□□ -1.52
SPG11-213ENST00000558988 IGHV3OR16-8A0A075B7F1 116 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 TRAV3A0A0B4J244 114 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 MFSD2BA6NFX1 497 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 GGCTO75223 188 aaKnown RBP5.52□□□□□ -1.53
SPG11-213ENST00000558988 S1PR2O95136 353 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 DHFRP00374 187 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 PMP2P02689 132 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 RLN1P04808 185 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 HLA-GP17693 338 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 PSMB6P28072 239 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 GPR183P32249 361 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 KIR2DS2P43631 304 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 BRWD1-AS2P59051 145 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 ERVK-16P61578 105 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 TIMM50Q3ZCQ8 353 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 HOGA1Q86XE5 327 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 PUSL1Q8N0Z8 303 aaKnown RBP5.52□□□□□ -1.53
SPG11-213ENST00000558988 SAMD12Q8N8I0 201 aa5.52□□□□□ -1.53
SPG11-213ENST00000558988 RPL36ALQ969Q0 106 aaKnown RBP5.52□□□□□ -1.53
SPG11-213ENST00000558988 YTHDF1Q9BYJ9 559 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms