RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 IGHV3-72A0A0B4J1Y9 119 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 MPTX1A8MV57 137 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 ARPC5O15511 151 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 TXNL1O43396 289 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 REG1BP48304 166 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 NMSQ5H8A3 153 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 TMEM268Q5VZI3 342 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 ACOT7LQ6ZUV0 252 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 LYZL2Q7Z4W2 148 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 KCNRGQ8N5I3 272 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 Q8N6K4 173 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 SLC35G3Q8N808 338 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 UBALD1Q8TB05 177 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 LSM10Q969L4 123 aaKnown RBP12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 HSD17B10Q99714 261 aaKnown RBP12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 MFFQ9GZY8 342 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 OR2D2Q9H210 308 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 ZNF580Q9UK33 172 aa12.46□□□□□ -0.41
CDC42BPB-203ENST00000558867 HUWE1Q7Z6Z7 4374 aaKnown RBP12.46□□□□□ -0.42
CDC42BPB-203ENST00000558867 SACSQ9NZJ4 4579 aa12.46□□□□□ -0.42
CDC42BPB-203ENST00000558867 EPPK1P58107 5090 aaKnown RBP12.46□□□□□ -0.42
CDC42BPB-203ENST00000558867 IGF1P05019 195 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 FRMD6-AS1P0C7T7 363 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 PSMB8P28062 276 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 CATR1Q13166 79 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 OPCMLQ14982 345 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 LINC00311Q8N616 119 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 GNG12Q9UBI6 72 aa12.45□□□□□ -0.42
CDC42BPB-203ENST00000558867 BIRC6Q9NR09 4857 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 A0A1W2PPE3 182 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 OVOL1O14753 267 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 SAP30O75446 220 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 SERPINE2P07093 398 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 RUNX1Q01196 453 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 CFHR3Q02985 330 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 RAB32Q13637 225 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 ZFAND6Q6FIF0 208 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 TMUB2Q71RG4 321 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 C8orf31Q8N9H6 132 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 ZNF439Q8NDP4 499 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 MBD2Q9UBB5 411 aa12.44□□□□□ -0.42
CDC42BPB-203ENST00000558867 H0YIZ8 118 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 DEDDO75618 318 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 RLN2P04090 185 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 GP9P14770 177 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 NDUFA5Q16718 116 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 ZNF585BQ52M93 769 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 TEX261Q6UWH6 196 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 FAM219AQ8IW50 185 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 CD300LFQ8TDQ1 290 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 C5orf30Q96GV9 206 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 AQP10Q96PS8 301 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 SDHAF2Q9NX18 166 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 U3KQ87 197 aa12.43□□□□□ -0.42
CDC42BPB-203ENST00000558867 IGHV3-43A0A0B4J1X8 118 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 A0A1B0GU03 582 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 RBFOX2O43251 390 aaKnown RBP eCLIP12.42□□□□□ -0.428e-8■□□□□ 8.6
CDC42BPB-203ENST00000558867 TNFSF12O43508 249 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 ATG12O94817 140 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 IGHV3-43DP0DP04 118 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 SMCO1Q147U7 214 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 LRRC37A5PQ49AS3 106 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 FAM71E2Q8N5Q1 922 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 ZNF491Q8N8L2 437 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 INO80EQ8NBZ0 244 aaPredicted RBP12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 OR51H1Q8NH63 302 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 ABHD14AQ9BUJ0 271 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 ARL6Q9H0F7 186 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 COA4Q9NYJ1 87 aa12.42□□□□□ -0.42
CDC42BPB-203ENST00000558867 DNAH1Q9P2D7 4330 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 I3L521 148 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 ST8SIA3O43173 380 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 PITX3O75364 302 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 IGKV1-39P01597 117 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 IGKV1D-39P04432 117 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 SLC51BQ86UW2 128 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 MYOZ3Q8TDC0 251 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 HSPB9Q9BQS6 159 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 PLEKHA2Q9HB19 425 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 GAR1Q9NY12 217 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 GSKIPQ9P0R6 139 aa12.41□□□□□ -0.42
CDC42BPB-203ENST00000558867 E5RGE8 158 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 K7EPK0 472 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 RAB29O14966 203 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 ST8SIA5O15466 376 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 BCL2L11O43521 198 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 PROP1O75360 226 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 JTBO76095 146 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 IFNA7P01567 189 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 MBPP02686 304 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 P0C879 139 aa12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 DUTP33316 252 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-203ENST00000558867 NUP62P37198 522 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms