RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MAPK1IP1LQ8NDC0 245 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 WFDC11Q8NEX6 87 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 C1orf159Q96HA4 380 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 AIFM2Q9BRQ8 373 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 LPAR2Q9HBW0 351 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 TPSG1Q9NRR2 321 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 RPRMQ9NS64 109 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 TIMM9Q9Y5J7 89 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 ZANQ9Y493 2812 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 CELSR1Q9NYQ6 3014 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 PRRC2AP48634 2157 aaKnown RBP10.41□□□□□ -0.74
SMAD3-207ENST00000558763 IFNA10P01566 189 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 USF1P22415 310 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-207ENST00000558763 PRTN3P24158 256 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 MC5RP33032 325 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 CCL20P78556 96 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 LCN2P80188 198 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 KLRD1Q13241 179 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 SLC25A24Q6NUK1 477 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 PRSS57Q6UWY2 283 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 SSX7Q7RTT5 188 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 OR5B3Q8NH48 314 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 SCGB1C1Q8TD33 95 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 FOXC2Q99958 501 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 UNKLQ9H9P5 680 aaKnown RBP10.41□□□□□ -0.74
SMAD3-207ENST00000558763 NDUFA4L2Q9NRX3 87 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 hCG_1809904A0A1W2PP81 198 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 A0A1W2PPE2 198 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 A0A1W2PR64 198 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 A0A1W2PRV1 198 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 TSPAN15O95858 294 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 OPN1MWP04001 364 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 CRYGBP07316 175 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 OPN1MW2P0DN77 364 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 OPN1MW3P0DN78 364 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 RPL8P62917 257 aaKnown RBP10.41□□□□□ -0.74
SMAD3-207ENST00000558763 AKR1C8PQ5T2L2 129 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 ACSM6Q6P461 480 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 DPPA3Q6W0C5 159 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 ETV3LQ6ZN32 361 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 C1orf122Q6ZSJ8 110 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 COMMD1Q8N668 190 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 KIR3DL3Q8N743 410 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 SLC24A4Q8NFF2 622 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 NPCDR1Q9BY65 106 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 WDR83OSQ9Y284 106 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 OTOGQ6ZRI0 2925 aa10.41□□□□□ -0.74
SMAD3-207ENST00000558763 A0A096LNT2 108 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 SCAF4O95104 1147 aaKnown RBP10.4□□□□□ -0.74
SMAD3-207ENST00000558763 CA2P00918 260 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 NPY1RP25929 384 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 CNTFRP26992 372 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 SERF2P84101 59 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 C10orf55Q5SWW7 151 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 OR10W1Q8NGF6 305 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 OR4A5Q8NH83 315 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 ZNF430Q9H8G1 570 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-207ENST00000558763 CREBBPQ92793 2442 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 MYO9AB2RTY4 2548 aa10.4□□□□□ -0.74
SMAD3-207ENST00000558763 FLNAP21333 2647 aaKnown RBP10.4□□□□□ -0.74
SMAD3-207ENST00000558763 RNASEK-C17orf49H0YIS7 233 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 SLC25A17O43808 307 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 FGF7P21781 194 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 DVL1P1P54792 670 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 TPTE2P1Q5T6R2 138 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 ATRAIDQ6UW56 229 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 TREML4Q6UXN2 200 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 CLCC1Q96S66 551 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 GGACTQ9BVM4 153 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 SIRPDQ9H106 197 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 PLEKHA3Q9HB20 300 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 FKBP11Q9NYL4 201 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 AMMECR1Q9Y4X0 333 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 TEX15Q9BXT5 2789 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 TRAV1-1A0A0B4J248 108 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 A0A1B0GV50 99 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 CD1BP29016 333 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 LGALS7P47929 136 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 RPP30P78346 268 aaKnown RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 DLK1P80370 383 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 HABP2Q14520 560 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 HNF4GQ14541 408 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 ARSJQ5FYB0 599 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 CFHR4Q92496 578 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 RPEQ96AT9 228 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 RCC1LQ96I51 464 aaKnown RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 NARS2Q96I59 477 aaKnown RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 HINT2Q9BX68 163 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 CARHSP1Q9Y2V2 147 aaKnown RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 LSM4Q9Y4Z0 139 aaKnown RBP10.39□□□□□ -0.75
SMAD3-207ENST00000558763 INSIG2Q9Y5U4 225 aa10.39□□□□□ -0.75
SMAD3-207ENST00000558763 IGHV2-70DA0A0C4DH43 119 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 ENSAO43768 121 aaKnown RBP10.38□□□□□ -0.75
SMAD3-207ENST00000558763 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
SMAD3-207ENST00000558763 RNASE2P10153 161 aaKnown RBP10.38□□□□□ -0.75
SMAD3-207ENST00000558763 HOXB4P17483 251 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms