RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ZNF367Q7RTV3 350 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 GBGT1Q8N5D6 347 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 FAM89BQ8N5H3 189 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 APH1BQ8WW43 257 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 ARHGAP5-AS1Q96IT6 56 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 FAM210BQ96KR6 192 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 RHPN1-AS1Q9BWJ2 59 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 THYN1Q9P016 225 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 CLEC2DQ9UHP7 191 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 TBC1D24Q9ULP9 559 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 MRPS7Q9Y2R9 242 aaKnown RBP4.83□□□□□ -1.64
LRRC28-207ENST00000558500 PRELID3BQ9Y3B1 194 aa4.83□□□□□ -1.64
LRRC28-207ENST00000558500 IGHV3-49A0A0A0MS15 119 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 IGLC7A0M8Q6 106 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 RAB27BO00194 218 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 EI24O14681 340 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 DFFBO76075 338 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 HLA-GP17693 338 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 C4BPBP20851 252 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 CRHBPP24387 322 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 NPY1RP25929 384 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 MAPK3P27361 379 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 DEFB131AP59861 70 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 RPL30P62888 115 aaKnown RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 GNGT1P63211 74 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 PAFAH1B2P68402 229 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 OR2B11Q5JQS5 317 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 KCTD9Q7L273 389 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 SPATA12Q7Z6I5 190 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 TRPT1Q86TN4 253 aaKnown RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 LRRTM1Q86UE6 522 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 STHQ8IWL8 128 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 PQLC1Q8N2U9 271 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 ZNF485Q8NCK3 441 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 TMEM116Q8NCL8 245 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 GIMAP1Q8WWP7 306 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 RAB24Q969Q5 203 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 CMTM3Q96MX0 182 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 ATP6V0BQ99437 205 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 URM1Q9BTM9 101 aaKnown RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 PECRQ9BY49 303 aa4.82□□□□□ -1.64
LRRC28-207ENST00000558500 SMPD3Q9NY59 655 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 DIMT1Q9UNQ2 313 aaKnown RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.82□□□□□ -1.64
LRRC28-207ENST00000558500 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 PNMA8CA0A1B0GUJ8 204 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 CD1AP06126 327 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 CDK1P06493 297 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 SPP1P10451 314 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 CD37P11049 281 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 MYL12AP19105 171 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 BRWD1-AS2P59051 145 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 TAS2R43P59537 309 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 OR2B8PP59922 312 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 PLA2G7Q13093 441 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 SMN1Q16637 294 aaKnown RBP4.81□□□□□ -1.64
LRRC28-207ENST00000558500 PLAC9Q5JTB6 97 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 TCF24Q7RTU0 167 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 H1FOOQ8IZA3 346 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-207ENST00000558500 C6orf223Q8N319 242 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 FAM24BQ8N5W8 94 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 CSNK1G2-AS1Q8NCQ2 148 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 CCDC197Q8NCU1 140 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 OR4S2Q8NH73 311 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 SLC7A6OSQ96CW6 309 aaPredicted RBP4.81□□□□□ -1.64
LRRC28-207ENST00000558500 ZNF414Q96IQ9 312 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 GINS4Q9BRT9 223 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 MS4A6AQ9H2W1 248 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 TMEM14BQ9NUH8 114 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 CLEC5AQ9NY25 188 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 C21orf62Q9NYP8 219 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 RBMX2Q9Y388 322 aaKnown RBP4.81□□□□□ -1.64
LRRC28-207ENST00000558500 VPS13BQ7Z7G8 4022 aa4.81□□□□□ -1.64
LRRC28-207ENST00000558500 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 TRAV14DV4A0A0A6YYC5 116 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 IGHV3-21A0A0B4J1V1 117 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 IGHV3-74A0A0B4J1X5 117 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 TRAV2A0A0B4J234 112 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 NBDYA0A0U1RRE5 68 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 IRGMA1A4Y4 181 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 J3QRK9 145 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 NUPL2O15504 423 aaKnown RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 CYB5BO43169 146 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 WBP4O75554 376 aaKnown RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 IGLV2-14P01704 120 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 CD5P06127 495 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 CTSGP08311 255 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 FCGR3AP08637 254 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 CD36P16671 472 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 FAM3BP58499 235 aaPredicted RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 MRPS15P82914 257 aaKnown RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 INSL4Q14641 139 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 P2RY14Q15391 338 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 SSX1Q16384 188 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 RBM48Q5RL73 367 aaKnown RBP4.8□□□□□ -1.64
LRRC28-207ENST00000558500 GDPD1Q8N9F7 314 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 UBAC2Q8NBM4 344 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 SCARB1Q8WTV0 552 aa4.8□□□□□ -1.64
LRRC28-207ENST00000558500 TCTEX1D2Q8WW35 142 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms