RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 EFNA4P52798 201 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 ATP5J2P56134 94 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 SELENOVP59797 346 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 ERVS71-1P61550 626 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 RSPO1Q2MKA7 263 aaPredicted RBP6.67□□□□□ -1.34
RTF1-205ENST00000558298 ZNF718Q3SXZ3 478 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 FBLN7Q53RD9 439 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 SPIN3Q5JUX0 258 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 RASL11AQ6T310 242 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 C12orf54Q6X4T0 127 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 Q6ZN92 141 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 TCF24Q7RTU0 167 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 LINC00596Q86U02 117 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 BAGE3Q86Y29 109 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 BAGE2Q86Y30 109 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 ZNF709Q8N972 641 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 OR5D18Q8NGL1 313 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 SPTSSAQ969W0 71 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 SPSB4Q96A44 273 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 PGAM5Q96HS1 289 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 GNB1LQ9BYB4 327 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 CSTL1Q9H114 145 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 PARLQ9H300 379 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 CR1P17927 2039 aa6.67□□□□□ -1.34
RTF1-205ENST00000558298 NAV3Q8IVL0 2385 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 DIRC3C9JPN6 131 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 M0R135 149 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 CHST1O43916 411 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 RAMP3O60896 148 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 PDCD6O75340 191 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 MPDU1O75352 247 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 FSTL3O95633 263 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 SERPINE2P07093 398 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 IGLC2P0DOY2 106 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 CD1BP29016 333 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 GNRHRP30968 328 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 CEACAM3P40198 252 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 RIPPLY3P57055 190 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 ZNF121P58317 390 aaPredicted RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 RHOBP62745 196 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 BATFQ16520 125 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 LRRC10Q5BKY1 277 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 PRR27Q6MZM9 219 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 MRPL54Q6P161 138 aaKnown RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 LINC00346Q8IVM7 164 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 SELENOHQ8IZQ5 122 aaKnown RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 MTURNQ8N3F0 131 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 OR8B12Q8NGG6 310 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 KLF14Q8TD94 323 aaPredicted RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 BORCS7Q96B45 105 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 ZNF799Q96GE5 643 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 HSPB9Q9BQS6 159 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 WDR61Q9GZS3 305 aaKnown RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 RAB1BQ9H0U4 201 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 ZNF665Q9H7R5 613 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 PATZ1Q9HBE1 687 aaKnown RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 PRR13Q9NZ81 148 aa6.66□□□□□ -1.34
RTF1-205ENST00000558298 FN1P02751 2386 aaKnown RBP6.66□□□□□ -1.34
RTF1-205ENST00000558298 ABCA1O95477 2261 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 A0A096LNT2 108 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 IGHV2-26A0A0B4J1V2 119 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 OR5B21A6NL26 309 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 C17orf100A8MU93 164 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 IQCF6A8MYZ5 107 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 VWC2LB2RUY7 222 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 CDIPTO14735 213 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 ADAM20O43506 726 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SYNGR2O43760 224 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 S1PR2O95136 353 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SLC25A16P16260 332 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SELEP16581 610 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 OMGP23515 440 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 CTRLP40313 264 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 REG1BP48304 166 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SPATA45Q537H7 98 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 CST9LP1Q5W188 147 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 LCN15Q6UWW0 184 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SAXO1Q8IYX7 474 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 OSR2Q8N2R0 312 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 CIARTQ8N365 385 aaPredicted RBP6.65□□□□□ -1.34
RTF1-205ENST00000558298 TMEM217Q8N7C4 229 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 OR10G8Q8NGN5 311 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 OR4F5Q8NH21 305 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SLC25A40Q8TBP6 338 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 TAF15Q92804 592 aaKnown RBP eCLIP6.65□□□□□ -1.34
RTF1-205ENST00000558298 PPP1R14AQ96A00 147 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 PERPQ96FX8 193 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 NUDT11Q96G61 164 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 SFRP2Q96HF1 295 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 KCNS1Q96KK3 526 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 OR4F4Q96R69 305 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 NKX3-1Q99801 234 aaPredicted RBP6.65□□□□□ -1.34
RTF1-205ENST00000558298 PMCHL2Q9BQD1 86 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 LIN7CQ9NUP9 197 aaKnown RBP6.65□□□□□ -1.34
RTF1-205ENST00000558298 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
RTF1-205ENST00000558298 NIPBLQ6KC79 2804 aaeCLIP6.65□□□□□ -1.35
RTF1-205ENST00000558298 CSPG4Q6UVK1 2322 aa6.65□□□□□ -1.35
RTF1-205ENST00000558298 ABCA2Q9BZC7 2435 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms