RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 HTR2BP41595 481 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 P2RY1P47900 373 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 OR2B8PP59922 312 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 HILS1P60008 231 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 RAB11AP62491 216 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 GNB1P62873 340 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 CX3CL1P78423 397 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 RAB32Q13637 225 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 CXorf66Q5JRM2 361 aaPredicted RBP9.86□□□□□ -0.83
TPM1-209ENST00000558072 C11orf87Q6NUJ2 197 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 TMEM219Q86XT9 240 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 INO80EQ8NBZ0 244 aaPredicted RBP9.86□□□□□ -0.83
TPM1-209ENST00000558072 SRSF12Q8WXF0 261 aaKnown RBP9.86□□□□□ -0.83
TPM1-209ENST00000558072 TAF15Q92804 592 aaKnown RBP eCLIP9.86□□□□□ -0.83
TPM1-209ENST00000558072 ST6GAL2Q96JF0 529 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 SMIM8Q96KF7 97 aa9.86□□□□□ -0.83
TPM1-209ENST00000558072 HEYLQ9NQ87 328 aaPredicted RBP9.86□□□□□ -0.83
TPM1-209ENST00000558072 LSM5Q9Y4Y9 91 aaKnown RBP9.86□□□□□ -0.83
TPM1-209ENST00000558072 SONP18583 2426 aaKnown RBP9.85□□□□□ -0.83
TPM1-209ENST00000558072 FN1P02751 2386 aaKnown RBP9.85□□□□□ -0.83
TPM1-209ENST00000558072 TRAV3A0A0B4J244 114 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 CORTO00230 105 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 CHST1O43916 411 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 C1QBP02746 253 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 RNASE1P07998 156 aaKnown RBP9.85□□□□□ -0.83
TPM1-209ENST00000558072 IZUMO4Q1ZYL8 232 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 ZFP69Q49AA0 526 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 LRRC37A5PQ49AS3 106 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 TMEM65Q6PI78 240 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 SGMS2Q8NHU3 365 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 ABHD5Q8WTS1 349 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 NEURL2Q9BR09 285 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 HINT2Q9BX68 163 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 RBKSQ9H477 322 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 STRAPQ9Y3F4 350 aaKnown RBP9.85□□□□□ -0.83
TPM1-209ENST00000558072 SVEP1Q4LDE5 3571 aa9.85□□□□□ -0.83
TPM1-209ENST00000558072 IGHV7-81A0A0B4J1V7 117 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 DNAJC9-AS1A6NH13 148 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 HMSDA8MTL9 139 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 AP4M1O00189 453 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 SSSCA1O60232 199 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 IGHG2P01859 326 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 IGF1P05019 195 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 LYL1P12980 280 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 CRIP2P52943 208 aaPredicted RBP9.84□□□□□ -0.83
TPM1-209ENST00000558072 POLR2GP62487 172 aaKnown RBP eCLIP9.84□□□□□ -0.83
TPM1-209ENST00000558072 BAXQ07812 192 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 AKIRIN2Q53H80 203 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 ARSJQ5FYB0 599 aaPredicted RBP9.84□□□□□ -0.83
TPM1-209ENST00000558072 ZNF546Q86UE3 836 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 STX12Q86Y82 276 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 PSENENQ9NZ42 101 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 THYN1Q9P016 225 aa9.84□□□□□ -0.83
TPM1-209ENST00000558072 MSGN1A6NI15 193 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 FCN1O00602 326 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 IFNA10P01566 189 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 HIST1H1BP16401 226 aaKnown RBP9.83□□□□□ -0.84
TPM1-209ENST00000558072 HBG1P69891 147 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 HBG2P69892 147 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 PJVKQ0ZLH3 352 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 C9orf152Q5JTZ5 239 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 OR2C3Q8N628 320 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 GRPEL2Q8TAA5 225 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 DCUN1D4Q92564 292 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 WDR89Q96FK6 387 aaPredicted RBP9.83□□□□□ -0.84
TPM1-209ENST00000558072 ESM1Q9NQ30 184 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 ZC4H2Q9NQZ6 224 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 TPSG1Q9NRR2 321 aa9.83□□□□□ -0.84
TPM1-209ENST00000558072 RCL1Q9Y2P8 373 aaKnown RBP9.83□□□□□ -0.84
TPM1-209ENST00000558072 FXYD6-FXYD2A0A087WZ82 144 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 NPIPB5A8MRT5 1133 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 H3BUA1 57 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 OR13C7P0DN81 318 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 VDAC2P45880 294 aaPredicted RBP9.82□□□□□ -0.84
TPM1-209ENST00000558072 CAV2P51636 162 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 SLC35B1P78383 322 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 OR2F1Q13607 317 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 MRGPRG-AS1Q2M3A8 158 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 ACOT7LQ6ZUV0 252 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 ZNF114Q8NC26 417 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 SLC24A4Q8NFF2 622 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 OR2T6Q8NHC8 308 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 PINX1Q96BK5 328 aaKnown RBP9.82□□□□□ -0.84
TPM1-209ENST00000558072 MAGT1Q9H0U3 335 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 PARP11Q9NR21 331 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 LYRM2Q9NU23 88 aaPredicted RBP9.82□□□□□ -0.84
TPM1-209ENST00000558072 MBD2Q9UBB5 411 aa9.82□□□□□ -0.84
TPM1-209ENST00000558072 A0A0D9SG52 128 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 RPS10-NUDT3A0A1W2PQS6 291 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 TMEM89A2RUT3 159 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 BRI3O95415 125 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 OPN1MWP04001 364 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 AMY1AP04745 511 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 CRYGCP07315 174 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 OR8U8P0C7N1 319 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 OPN1MW2P0DN77 364 aa9.81□□□□□ -0.84
TPM1-209ENST00000558072 OPN1MW3P0DN78 364 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms