RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 KRTAP4-9Q9BYQ8 210 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 IMUPQ9GZP8 106 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 KLK12Q9UKR0 248 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 PTPRJQ12913 1337 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 NUP160Q12769 1436 aa2.33□□□□□ -2.04
TDP1-217ENST00000557782 PLXND1Q9Y4D7 1925 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 RB1CC1Q8TDY2 1594 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 MAST2Q6P0Q8 1798 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 IGKV2D-24A0A075B6R9 120 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 IGKV1D-37A0A075B6S9 117 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 IGHV3-73A0A0B4J1V6 119 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 CLDN25C9JDP6 229 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 UBFD1O14562 309 aaKnown RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 BANF1O75531 89 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 OR2J2O76002 312 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 DHFRP00374 187 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 RPS4Y1P22090 263 aaKnown RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 ALDH3A1P30838 453 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 TPI1P60174 286 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 HIST1H4AP62805 103 aaKnown RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 RBX1P62877 108 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 EIF4EBP2Q13542 120 aaPredicted RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 EIF4E3Q8N5X7 224 aaKnown RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 ZNF709Q8N972 641 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 CNEP1R1Q8N9A8 125 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 MBD3L1Q8WWY6 194 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 H1FXQ92522 213 aaKnown RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 ASF1BQ9NVP2 202 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 IL36BQ9NZH7 164 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 FUT9Q9Y231 359 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 ZNF443Q9Y2A4 671 aaPredicted RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 VIRMAQ69YN4 1812 aaKnown RBP2.32□□□□□ -2.04
TDP1-217ENST00000557782 CACNA1SQ13698 1873 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 KIF24Q5T7B8 1368 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 ABCC12Q96J65 1359 aa2.32□□□□□ -2.04
TDP1-217ENST00000557782 ADAMTSL1Q8N6G6 1762 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 A0A1W2PRE2 83 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 PRORSD1PA6NEY8 169 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 RIIAD1A6NNX1 92 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 TXNDC9O14530 226 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 PIAS1O75925 651 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 NPYP01303 97 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 TFPTP0C1Z6 253 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 CASP1P29466 404 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 PIGPP57054 158 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 KPRPQ5T749 579 aaPredicted RBP2.31□□□□□ -2.04
TDP1-217ENST00000557782 AADACL3Q5VUY0 350 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 CLVS1Q8IUQ0 354 aaPredicted RBP2.31□□□□□ -2.04
TDP1-217ENST00000557782 MUC7Q8TAX7 377 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 ZNF675Q8TD23 568 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 PLEKHB2Q96CS7 222 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 ZNF285Q96NJ3 590 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 CCDC32Q9BV29 185 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 MED11Q9P086 117 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 ZNF407Q9C0G0 2248 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 FMN1Q68DA7 1419 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 DENND4BO75064 1496 aaPredicted RBP2.31□□□□□ -2.04
TDP1-217ENST00000557782 HECW1Q76N89 1606 aa2.31□□□□□ -2.04
TDP1-217ENST00000557782 ZNF106Q9H2Y7 1883 aaKnown RBP2.31□□□□□ -2.04
TDP1-217ENST00000557782 LCTP09848 1927 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 PRR14LQ5THK1 2151 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 TRAV38-1A0A0B4J264 116 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 LOC102725191A0A1B0GVB3 256 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 DUXBA0A1W2PPF3 345 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 LEPROTO15243 131 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 CDS2O95674 445 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 C1QAP02745 245 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 CD200P41217 278 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 PSMD8P48556 350 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 GTF2A1P52655 376 aaPredicted RBP2.3□□□□□ -2.04
TDP1-217ENST00000557782 EMP1P54849 157 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 FOXA1P55317 472 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 RPL18Q07020 188 aaKnown RBP2.3□□□□□ -2.04
TDP1-217ENST00000557782 HTR4Q13639 388 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 NOXRED1Q6NXP6 359 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 OR10P1Q8NGE3 313 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 C11orf40Q8WZ69 217 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 MIEN1Q9BRT3 115 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 DERL1Q9BUN8 251 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 EFCAB11Q9BUY7 163 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 RSPO3Q9BXY4 272 aaPredicted RBP2.3□□□□□ -2.04
TDP1-217ENST00000557782 LRTM1Q9HBL6 345 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 LAMTOR3Q9UHA4 124 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 ZNF835Q9Y2P0 537 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 YEATS2Q9ULM3 1422 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 NEO1Q92859 1461 aa2.3□□□□□ -2.04
TDP1-217ENST00000557782 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.3□□□□□ -2.04
TDP1-217ENST00000557782 TP53BP1Q12888 1972 aaPredicted RBP2.3□□□□□ -2.04
TDP1-217ENST00000557782 UBR2Q8IWV8 1755 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 SCRIBQ14160 1630 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 ZCCHC11Q5TAX3 1644 aaKnown RBP2.29□□□□□ -2.04
TDP1-217ENST00000557782 UHRF1BP1Q6BDS2 1440 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 C19orf71A6NCJ1 209 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 GGT3PA6NGU5 568 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 A8MU10 97 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
TDP1-217ENST00000557782 RPL36A-HNRNPH2H7BZ11 118 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms