RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 OR10X1Q8NGY0 326 aa9.83□□□□□ -0.84
TMEM260-215ENST00000557626 TMEM230Q96A57 120 aa9.83□□□□□ -0.84
TMEM260-215ENST00000557626 PRRT1Q99946 306 aa9.83□□□□□ -0.84
TMEM260-215ENST00000557626 FBXL7Q9UJT9 491 aa9.83□□□□□ -0.84
TMEM260-215ENST00000557626 ZNF221Q9UK13 617 aa9.83□□□□□ -0.84
TMEM260-215ENST00000557626 TRAV41A0A0B4J266 112 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 IGHV1-3A0A0C4DH29 117 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 M0R1X1 148 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 ATP6V0E1O15342 81 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 PGLYRP1O75594 196 aaPredicted RBP9.82□□□□□ -0.84
TMEM260-215ENST00000557626 ZP3P21754 424 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 DUTP33316 252 aaKnown RBP9.82□□□□□ -0.84
TMEM260-215ENST00000557626 FAUP35544 74 aaKnown RBP9.82□□□□□ -0.84
TMEM260-215ENST00000557626 MSMO1Q15800 293 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 DEFB135Q30KP9 77 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 GLDNQ6ZMI3 551 aaPredicted RBP9.82□□□□□ -0.84
TMEM260-215ENST00000557626 NRARPQ7Z6K4 114 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 CASTOR1Q8WTX7 329 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 PARP11Q9NR21 331 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 PIPOXQ9P0Z9 390 aa9.82□□□□□ -0.84
TMEM260-215ENST00000557626 TNFSF12O43508 249 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 GAPDHP04406 335 aaKnown RBP9.81□□□□□ -0.84
TMEM260-215ENST00000557626 TCRBP04435 133 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 CTSDP07339 412 aaPredicted RBP9.81□□□□□ -0.84
TMEM260-215ENST00000557626 SURF2Q15527 256 aaPredicted RBP9.81□□□□□ -0.84
TMEM260-215ENST00000557626 PHLDA2Q53GA4 152 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 FAM71F2Q6NXP2 309 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 POC5Q8NA72 575 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 DUSP18Q8NEJ0 188 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 OR5AN1Q8NGI8 311 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 RITA1Q96K30 269 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 SLC2A9Q9NRM0 540 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 SCP2D1Q9UJQ7 156 aa9.81□□□□□ -0.84
TMEM260-215ENST00000557626 RBM7Q9Y580 266 aaKnown RBP9.81□□□□□ -0.84
TMEM260-215ENST00000557626 H0YJW9 148 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 GPR31O00270 319 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 CSN3P07498 182 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 PGAM2P15259 253 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 RND3P61587 244 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 SUPT4H1P63272 117 aaKnown RBP9.8□□□□□ -0.84
TMEM260-215ENST00000557626 ZNF585BQ52M93 769 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 Q6ZWC4 215 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 POM121L12Q8N7R1 296 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 MINDY2Q8NBR6 621 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 OR8H1Q8NGG4 311 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
TMEM260-215ENST00000557626 SLC25A21Q9BQT8 299 aaPredicted RBP9.8□□□□□ -0.84
TMEM260-215ENST00000557626 A0A1W2PN81 502 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 CENPXA8MT69 81 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 MPPED1O15442 326 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 SLC22A5O76082 557 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 MOSP00540 346 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 IL3RAP26951 378 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 CHRNA7P36544 502 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 F2RL1P55085 397 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 PIGPP57054 158 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 DHODHQ02127 395 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 KLF5Q13887 457 aaPredicted RBP9.79□□□□□ -0.84
TMEM260-215ENST00000557626 SERTAD4-AS1Q5TG53 156 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 TBC1D26Q86UD7 250 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 ZBTB34Q8NCN2 500 aa9.79□□□□□ -0.84
TMEM260-215ENST00000557626 RANGRFQ9HD47 186 aaPredicted RBP9.79□□□□□ -0.84
TMEM260-215ENST00000557626 CRYM-AS1A6NIL9 109 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 ZNF785A8K8V0 405 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 IGKV1-16P04430 117 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 RLN1P04808 185 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 CTRB1P17538 263 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 ANXA7P20073 488 aaKnown RBP9.78□□□□□ -0.84
TMEM260-215ENST00000557626 MECP2P51608 486 aaKnown RBP9.78□□□□□ -0.84
TMEM260-215ENST00000557626 GUCA2BQ16661 112 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 ECSCRQ19T08 205 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 CD300EQ496F6 205 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-215ENST00000557626 CTRB2Q6GPI1 263 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 MZT2BQ6NZ67 158 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 LPCAT3Q6P1A2 487 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 ZNF66Q6ZN08 573 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 SLC25A42Q86VD7 318 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 OR51H1Q8NH63 302 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 ZFAND1Q8TCF1 268 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 ZNF486Q96H40 463 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-215ENST00000557626 TP53RKQ96S44 253 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 HSD17B10Q99714 261 aaKnown RBP9.78□□□□□ -0.84
TMEM260-215ENST00000557626 C20orf85Q9H1P6 137 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 NUDT15Q9NV35 164 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 RNF213Q63HN8 5207 aa9.78□□□□□ -0.84
TMEM260-215ENST00000557626 TRAV6A0A075B6T7 132 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 A0A0B4J293 547 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 FAM240BA0A1B0GVZ2 78 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 SRRM4A7MD48 611 aaKnown RBP9.77□□□□□ -0.85
TMEM260-215ENST00000557626 SOX15O60248 233 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 F2RP25116 425 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 CD1BP29016 333 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 OXA1LQ15070 435 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 SP6Q3SY56 376 aa9.77□□□□□ -0.85
TMEM260-215ENST00000557626 OR2B11Q5JQS5 317 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms