RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ZNF436Q9C0F3 470 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-210ENST00000557431 VCX3AQ9NNX9 186 aa10.4□□□□□ -0.74
SLIRP-210ENST00000557431 DAPK2Q9UIK4 370 aa10.4□□□□□ -0.74
SLIRP-210ENST00000557431 TP53TG1Q9Y2A0 90 aa10.4□□□□□ -0.74
SLIRP-210ENST00000557431 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
SLIRP-210ENST00000557431 UFC1Q9Y3C8 167 aa10.4□□□□□ -0.74
SLIRP-210ENST00000557431 IGKV3-7A0A075B6H7 116 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 IGHV3-49A0A0A0MS15 119 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 UPK2O00526 184 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 SLC22A5O76082 557 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 CTSDP07339 412 aaPredicted RBP10.39□□□□□ -0.75
SLIRP-210ENST00000557431 CLEC2LP0C7M8 214 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 TFPI2P48307 235 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 ARPC4P59998 168 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 NANOS2P60321 138 aaKnown RBP10.39□□□□□ -0.75
SLIRP-210ENST00000557431 SLC25A24Q6NUK1 477 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 SFXN4Q6P4A7 337 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 STPG3Q8N7X2 389 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 UBAC2Q8NBM4 344 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 OR5H6Q8NGV6 325 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 YIPF6Q96EC8 236 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 SLC5A7Q9GZV3 580 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 DCSTAMPQ9H295 470 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 C5orf66Q9H5L9 145 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 TMEM140Q9NV12 185 aa10.39□□□□□ -0.75
SLIRP-210ENST00000557431 MEIS3P1A6NDR6 274 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 TSPAN4O14817 238 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 PPYP01298 95 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 OR13C7P0DN81 318 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 ELLP55199 621 aaPredicted RBP10.38□□□□□ -0.75
SLIRP-210ENST00000557431 PRR20EP86478 221 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 PRR20CP86479 221 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 PRR20DP86480 221 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 PRR20BP86481 221 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 PRR20AP86496 221 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 MXD1Q05195 221 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 TMEM17Q86X19 198 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 BEST4Q8NFU0 473 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 CD300LFQ8TDQ1 290 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 ZNF414Q96IQ9 312 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 HINT2Q9BX68 163 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 FBXL17Q9UF56 701 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 NSG2Q9Y328 171 aa10.38□□□□□ -0.75
SLIRP-210ENST00000557431 IGHV3OR16-13A0A075B7E8 117 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 IGHV3-74A0A0B4J1X5 117 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 F8W735 103 aaPredicted RBP10.37□□□□□ -0.75
SLIRP-210ENST00000557431 DEFB4AO15263 64 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 PTBP1P26599 531 aaKnown RBP eCLIP10.37□□□□□ -0.75
SLIRP-210ENST00000557431 ADMP35318 185 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 WT1-ASQ06250 92 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 ARL6IP1Q15041 203 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 ZNF818PQ6ZRF7 136 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 DMBX1Q8NFW5 382 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 OR4A5Q8NH83 315 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 COMMD5Q9GZQ3 224 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 MAP6D1Q9H9H5 199 aa10.37□□□□□ -0.75
SLIRP-210ENST00000557431 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
SLIRP-210ENST00000557431 TRAV18A0A075B6X5 111 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 TEX50A0A1B0GTY4 177 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 UBE2CO00762 179 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 NQO2P16083 231 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 SCAND1P57086 179 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 GDPD1Q8N9F7 314 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 RNF2Q99496 336 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 QTRT1Q9BXR0 403 aaKnown RBP10.36□□□□□ -0.75
SLIRP-210ENST00000557431 RHBDL2Q9NX52 303 aa10.36□□□□□ -0.75
SLIRP-210ENST00000557431 KIR2DL5BA0A0G2JN68 375 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 KIR2DL5BA0A0G2JPC4 375 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 HPRT1P00492 218 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 SERPINE2P07093 398 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 TRAPPC2P0DI81 140 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 TRAPPC2BP0DI82 140 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 TGFBR1P36897 503 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 TAS2R31P59538 309 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 CATR1Q13166 79 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 POU2AF1Q16633 256 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 Q56UQ5 140 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 IDNKQ5T6J7 187 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 AADACL3Q5VUY0 350 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 LGALS9CQ6DKI2 356 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 LAMTOR1Q6IAA8 161 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 KIR2DL5AQ8N109 375 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 GBGT1Q8N5D6 347 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 KIR2DL5BQ8NHK3 375 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 VN1R17PQ8TDU5 208 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 SCARB1Q8WTV0 552 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 SLC25A38Q96DW6 304 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 GALNT14Q96FL9 552 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 THYN1Q9P016 225 aa10.35□□□□□ -0.75
SLIRP-210ENST00000557431 MUC4Q99102 2169 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 OR4C46A6NHA9 309 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 K7EIM0 57 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 NDUFA4O00483 81 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 TMEM127O75204 238 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 SCGNO76038 276 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 RPS19P39019 145 aaKnown RBP10.34□□□□□ -0.75
SLIRP-210ENST00000557431 LSM3P62310 102 aaKnown RBP10.34□□□□□ -0.75
SLIRP-210ENST00000557431 HOGA1Q86XE5 327 aa10.34□□□□□ -0.75
SLIRP-210ENST00000557431 BSCL2Q96G97 398 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms