RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 ALX4Q9H161 411 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 GPN1Q9HCN4 374 aaPredicted RBP7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 ZNF355PQ9NSJ1 428 aa7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 RHBDL2Q9NX52 303 aa7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 ANXA10Q9UJ72 324 aa7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 PRELID3BQ9Y3B1 194 aa7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 DNAH9Q9NYC9 4486 aa7.54□□□□□ -1.2
HNRNPC-228ENST00000557033 IGHV4OR15-8A0A075B7B6 117 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 A0A087WW49 117 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 LOC100506127A0A0U1RQW1 187 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 TMEM235A6NFC5 223 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 CREBL2O60519 120 aaPredicted RBP7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 CRYZL1O95825 349 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 IGHV3-11P01762 117 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 ZP3P21754 424 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 AADACP22760 399 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 NFYAP23511 347 aaPredicted RBP7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 MXD1Q05195 221 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 NEDD8Q15843 81 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 PRSS8Q16651 343 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 TIMM50Q3ZCQ8 353 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 IDNKQ5T6J7 187 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 NUDCD2Q8WVJ2 157 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 USMG5Q96IX5 58 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 DIABLOQ9NR28 239 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 SPATA2Q9UM82 520 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 RBMX2Q9Y388 322 aaKnown RBP7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 PAM16Q9Y3D7 125 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 COL7A1Q02388 2944 aa7.53□□□□□ -1.2
HNRNPC-228ENST00000557033 TRAV18A0A075B6X5 111 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 MSGN1A6NI15 193 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 J3QRK9 145 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 SSX5O60225 188 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 SAP30O75446 220 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 IGLV2-14P01704 120 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 CDK10Q15131 360 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 MSMO1Q15800 293 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 CTF1Q16619 201 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 MRGPRG-AS1Q2M3A8 158 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 Q75L30 129 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 HOGA1Q86XE5 327 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 OR6Q1Q8NGQ2 317 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 OR5H6Q8NGV6 325 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 OR4C12Q96R67 309 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 PHB2Q99623 299 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 HSD17B10Q99714 261 aaKnown RBP7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 DCUN1D5Q9BTE7 237 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 RNF167Q9H6Y7 350 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 FAM212BQ9NTI7 297 aaPredicted RBP7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 MRPS7Q9Y2R9 242 aaKnown RBP7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 SMAD5-AS1Q9Y6J3 95 aa7.52□□□□□ -1.21
HNRNPC-228ENST00000557033 OR9G9P0C7N8 305 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 CBX5P45973 191 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 ARPC4P59998 168 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 TNXAQ16473 311 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 TATDN3Q17R31 274 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 C11orf87Q6NUJ2 197 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 ZNF343Q6P1L6 599 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 ZNF66Q6ZN08 573 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 MMD2Q8IY49 270 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 SLC24A4Q8NFF2 622 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 BEST4Q8NFU0 473 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 VSTM2AQ8TAG5 236 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 SRSF12Q8WXF0 261 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 SLC25A38Q96DW6 304 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 S100A16Q96FQ6 103 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 SPIN2AQ99865 258 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 SPIN2BQ9BPZ2 258 aa7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 PEF1Q9UBV8 284 aaKnown RBP7.51□□□□□ -1.21
HNRNPC-228ENST00000557033 A0A087WXM4 84 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 IGKV1D-13A0A0B4J2D9 117 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 OR2A4O95047 310 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 IGKV1-13P0DP09 117 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 GP9P14770 177 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 FCGR2CP31995 323 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 RPL30P62888 115 aaKnown RBP7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 EIF4EBP1Q13541 118 aaPredicted RBP7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 KLF5Q13887 457 aaPredicted RBP7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 IDO2Q6ZQW0 420 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 SLC25A42Q86VD7 318 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 TTC9CQ8N5M4 171 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 ADAD2Q8NCV1 583 aaKnown RBP7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 OR4S2Q8NH73 311 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 ACOT12Q8WYK0 555 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 OR2A7Q96R45 310 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 AUNIPQ9H7T9 357 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 ZNF430Q9H8G1 570 aaPredicted RBP7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 VCX3AQ9NNX9 186 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 COA4Q9NYJ1 87 aa7.5□□□□□ -1.21
HNRNPC-228ENST00000557033 FAM223BA6NKX1 122 aa7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 DBX1A6NMT0 343 aa7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 AIREO43918 545 aa7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 TNFAIP8O95379 198 aa7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 HRASP01112 189 aa7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 IGLV1-51P01701 117 aa7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 SAA1P0DJI8 122 aaPredicted RBP7.49□□□□□ -1.21
HNRNPC-228ENST00000557033 SPNP16150 400 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms