RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C21orf62Q9NYP8 219 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 PSORS1C1Q9UIG5 152 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 ETV7Q9Y603 341 aa10.12□□□□□ -0.79
ACTN1-219ENST00000556432 IGLV2-18A0A075B6J9 118 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 DEFB131BA0A096LNP1 70 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 IGKV1D-13A0A0B4J2D9 117 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 C15orf61A6NNL5 157 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 MFNGO00587 321 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 CHEK1O14757 476 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 HLA-DQB1P01920 261 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 IGKV1-13P0DP09 117 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 PAFAH1B2P68402 229 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 IRF3Q14653 427 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 SOHLH1Q5JUK2 328 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 HES5Q5TA89 166 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 UBE2DNLQ8IWF7 75 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 STHQ8IWL8 128 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 MFSD4AQ8N468 514 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 DHRSXQ8N5I4 330 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 GDPD1Q8N9F7 314 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 BPIFB6Q8NFQ5 453 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 AIFM2Q9BRQ8 373 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 NDUFAF3Q9BU61 184 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 QTRT1Q9BXR0 403 aaKnown RBP10.11□□□□□ -0.79
ACTN1-219ENST00000556432 BET1LQ9NYM9 111 aa10.11□□□□□ -0.79
ACTN1-219ENST00000556432 DNAH17Q9UFH2 4485 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 DNASE2O00115 360 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-219ENST00000556432 ARL6IP5O75915 188 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 IFNA10P01566 189 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 IGLV2-14P01704 120 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 AMBPP02760 352 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 OR13C7P0DN81 318 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 MIFP14174 115 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 DEFB131AP59861 70 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 LIPKQ5VXJ0 399 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 LAIR2Q6ISS4 152 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 Q6ZS49 121 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 ZNF767PQ75MW2 155 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 OR10W1Q8NGF6 305 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 GIMAP1Q8WWP7 306 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 UFD1Q92890 307 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 SRSF8Q9BRL6 282 aaKnown RBP10.1□□□□□ -0.79
ACTN1-219ENST00000556432 C8orf4Q9NR00 106 aa10.1□□□□□ -0.79
ACTN1-219ENST00000556432 TRAV3A0A0B4J244 114 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 TNFSF12O43508 249 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 ATP6V1G2O95670 118 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 CTXN2P0C2S0 81 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 CALRP27797 417 aaKnown RBP10.09□□□□□ -0.79
ACTN1-219ENST00000556432 BRWD1-AS2P59051 145 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
ACTN1-219ENST00000556432 SPHARQ15513 63 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 ZNF66Q6ZN08 573 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 TCF24Q7RTU0 167 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 HINT2Q9BX68 163 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 VCXQ9H320 206 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 V9GY05 133 aa10.09□□□□□ -0.79
ACTN1-219ENST00000556432 C16orf90A8MZG2 172 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 NUPL2O15504 423 aaKnown RBP10.08□□□□□ -0.8
ACTN1-219ENST00000556432 IFNA21P01568 189 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 IFNA17P01571 189 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 EIF4EP06730 217 aaKnown RBP10.08□□□□□ -0.8
ACTN1-219ENST00000556432 DTYMKP23919 212 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 RELQ04864 619 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-219ENST00000556432 C8orf59Q8N0T1 100 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-219ENST00000556432 SPAG16Q8N0X2 631 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 DMBX1Q8NFW5 382 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 SCARB1Q8WTV0 552 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 ELF5Q9UKW6 265 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-219ENST00000556432 PKD1P98161 4303 aa10.08□□□□□ -0.8
ACTN1-219ENST00000556432 ELOA3CA0A087WX78 387 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-219ENST00000556432 METTL21EPA6NDL7 271 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 UPK2O00526 184 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 SERPINE2P07093 398 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 HSMCR30P0CW71 290 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 TRAPPC2P0DI81 140 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 TRAPPC2BP0DI82 140 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 RPS25P62851 125 aaKnown RBP10.07□□□□□ -0.8
ACTN1-219ENST00000556432 EIF4EBP1Q13541 118 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-219ENST00000556432 IZUMO2Q6UXV1 221 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 TMEM91Q6ZNR0 172 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 ATP6V0BQ99437 205 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 TMEM140Q9NV12 185 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 CELA1Q9UNI1 258 aa10.07□□□□□ -0.8
ACTN1-219ENST00000556432 TRAV14DV4A0A0A6YYC5 116 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 F8W735 103 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-219ENST00000556432 SULT1C2O00338 296 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 ST8SIA3O43173 380 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 DFFBO76075 338 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 NQO2P16083 231 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 WT1-ASQ06250 92 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 TMEM41BQ5BJD5 291 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 THOC7Q6I9Y2 204 aaKnown RBP10.06□□□□□ -0.8
ACTN1-219ENST00000556432 HSD17B13Q7Z5P4 300 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-219ENST00000556432 SECTM1Q8WVN6 248 aa10.06□□□□□ -0.8
ACTN1-219ENST00000556432 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms