RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 CLDN12P56749 244 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 RPL30P62888 115 aaKnown RBP6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 EIF4EBP1Q13541 118 aaPredicted RBP6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 TRAM1Q15629 374 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 SSX1Q16384 188 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 C10orf55Q5SWW7 151 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 LIPKQ5VXJ0 399 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 PUSL1Q8N0Z8 303 aaKnown RBP6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 OR52B4Q8NGK2 314 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 CACNG8Q8WXS5 425 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 ACOT12Q8WYK0 555 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 TMEM203Q969S6 136 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 MARC2Q969Z3 335 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 RAB3CQ96E17 227 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 V9GY05 133 aa6.61□□□□□ -1.35
GTF2A1-204ENST00000556268 KIR2DL5BA0A0G2JN68 375 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 KIR2DL5BA0A0G2JPC4 375 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 ERICH4A6NGS2 130 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 PTGES3LE9PB15 166 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 UBE2CO00762 179 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 ARL6IP5O75915 188 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 ACTL6BO94805 426 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 FGF2P09038 288 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 GNB3P16520 340 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 CTRB1P17538 263 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 MAS1LP35410 378 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 MAP2K4P45985 399 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 LGALS9CQ6DKI2 356 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 CTRB2Q6GPI1 263 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 OR4A47Q6IF82 309 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 CLEC19AQ6UXS0 136 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 LYG2Q86SG7 212 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 KIR2DL5AQ8N109 375 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 RPP25LQ8N5L8 163 aaKnown RBP6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 OR10R2Q8NGX6 335 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 RNF183Q96D59 192 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 OR2A7Q96R45 310 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 DUSP21Q9H596 190 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 C5orf66Q9H5L9 145 aa6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 MRPL27Q9P0M9 148 aaKnown RBP6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 KLK5Q9Y337 293 aaPredicted RBP6.6□□□□□ -1.35
GTF2A1-204ENST00000556268 HECTD4Q9Y4D8 3996 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 DNAH6Q9C0G6 4158 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 IGLV11-55A0A075B6I3 123 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 TRBV7-1A0A0A6YYK4 115 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 ZNF320A2RRD8 509 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 CXorf65A6NEN9 183 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 FCGR3BO75015 233 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 SLC22A5O76082 557 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 CTXN2P0C2S0 81 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 HIST1H1DP16402 221 aaKnown RBP6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 DTYMKP23919 212 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 ARL3P36405 182 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 RPS25P62851 125 aaKnown RBP6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 FABP5Q01469 135 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 ARFRP1Q13795 201 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 MED22Q15528 200 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 OGFRL1Q5TC84 451 aaPredicted RBP6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 UNQ9165/PRO28630Q6UXU0 137 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 C19orf35Q6ZS72 473 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 VKORC1L1Q8N0U8 176 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 ZNF645Q8N7E2 425 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 VSTM2AQ8TAG5 236 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 MAFIPQ8WZ33 124 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 UFD1Q92890 307 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 DCUN1D5Q9BTE7 237 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 ZNF436Q9C0F3 470 aaPredicted RBP6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 RBMX2Q9Y388 322 aaKnown RBP6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 OR2W1Q9Y3N9 320 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 RBM7Q9Y580 266 aaKnown RBP6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
GTF2A1-204ENST00000556268 TRAV1-2A0A0B4J238 106 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 IGLV5-39A0A0G2JS06 123 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 CASQ2O14958 399 aaPredicted RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 KBTBD11O94819 623 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 IGHV3-23P01764 117 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 AREGP15514 252 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 HIST1H1BP16401 226 aaKnown RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 PSMA1P25786 263 aaKnown RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 PTBP1P26599 531 aaKnown RBP eCLIP6.58□□□□□ -1.367e-21■■□□□ 14
GTF2A1-204ENST00000556268 CALRP27797 417 aaKnown RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 RPL27AP46776 148 aaKnown RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 APOC4P55056 127 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 MRPS15P82914 257 aaKnown RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 OR1L6Q8NGR2 347 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 ZNF502Q8TBZ5 544 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 EEF1AKMT3Q96AZ1 226 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 SPAG8Q99932 426 aaPredicted RBP6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 GINS4Q9BRT9 223 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 DCSTAMPQ9H295 470 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 ACOT13Q9NPJ3 140 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 PRELID3BQ9Y3B1 194 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 DNAH17Q9UFH2 4485 aa6.58□□□□□ -1.36
GTF2A1-204ENST00000556268 FAT2Q9NYQ8 4349 aa6.57□□□□□ -1.36
GTF2A1-204ENST00000556268 IGKV1D-13A0A0B4J2D9 117 aa6.57□□□□□ -1.36
GTF2A1-204ENST00000556268 IFITM5A6NNB3 132 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms