RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 TNCP24821 2201 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 A0A1W2PN81 502 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 CLDN34H7C241 214 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 L7N2F9 121 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 AMY1AP04745 511 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 MYOD1P15172 320 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 CHRNA7P36544 502 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 POLR2GP62487 172 aaKnown RBP eCLIP8.75□□□□□ -1.01
TMEM260-208ENST00000555905 VAMP2P63027 116 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 CX3CL1P78423 397 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 PRCDQ00LT1 54 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 C9orf152Q5JTZ5 239 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 C10orf55Q5SWW7 151 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 GRPEL2Q8TAA5 225 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 DTD1Q8TEA8 209 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 SRSF12Q8WXF0 261 aaKnown RBP8.75□□□□□ -1.01
TMEM260-208ENST00000555905 ARPC1AQ92747 370 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 DUX5Q96PT3 197 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 CIB3Q96Q77 187 aaPredicted RBP8.75□□□□□ -1.01
TMEM260-208ENST00000555905 NPFFR1Q9GZQ6 430 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 HIPK2Q9H2X6 1198 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 HEYLQ9NQ87 328 aaPredicted RBP8.75□□□□□ -1.01
TMEM260-208ENST00000555905 NDUFA4L2Q9NRX3 87 aa8.75□□□□□ -1.01
TMEM260-208ENST00000555905 RCL1Q9Y2P8 373 aaKnown RBP8.75□□□□□ -1.01
TMEM260-208ENST00000555905 IGHV7-81A0A0B4J1V7 117 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 MSGN1A6NI15 193 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 E5RGE8 158 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 SMLR1H3BR10 107 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 KCNAB3O43448 404 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 GPR137BO60478 399 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 DEDDO75618 318 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 IAPPP10997 89 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 HILS1P60008 231 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 RPL23AP62750 156 aaKnown RBP8.74□□□□□ -1.01
TMEM260-208ENST00000555905 RPP30P78346 268 aaKnown RBP8.74□□□□□ -1.01
TMEM260-208ENST00000555905 C11orf87Q6NUJ2 197 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 PRSS54Q6PEW0 395 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 HSD17B13Q7Z5P4 300 aaPredicted RBP8.74□□□□□ -1.01
TMEM260-208ENST00000555905 SRSF8Q9BRL6 282 aaKnown RBP8.74□□□□□ -1.01
TMEM260-208ENST00000555905 MBD2Q9UBB5 411 aa8.74□□□□□ -1.01
TMEM260-208ENST00000555905 NSD1Q96L73 2696 aaPredicted RBP8.73□□□□□ -1.01
TMEM260-208ENST00000555905 FXYD6-FXYD2A0A087WZ82 144 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 TRAV14DV4A0A0A6YYC5 116 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 SH2D7A6NKC9 451 aaPredicted RBP8.73□□□□□ -1.01
TMEM260-208ENST00000555905 TRIM77I1YAP6 450 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 PLXNB1O43157 2135 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 C1QBP02746 253 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 SLC25A4P12235 298 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 TAS2R30P59541 319 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 BLCAPP62952 87 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 SSBP2P81877 361 aaPredicted RBP8.73□□□□□ -1.01
TMEM260-208ENST00000555905 ERHP84090 104 aaKnown RBP8.73□□□□□ -1.01
TMEM260-208ENST00000555905 CD300CQ08708 224 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 ZFP69Q49AA0 526 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 Q5BKY6 102 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 SLC35E3Q7Z769 313 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 OR10W1Q8NGF6 305 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 DCUN1D4Q92564 292 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 SMIM8Q96KF7 97 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 HSPB9Q9BQS6 159 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 RNF126Q9BV68 326 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 PRSS22Q9GZN4 317 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 ESM1Q9NQ30 184 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 PARP11Q9NR21 331 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 OR5AC2Q9NZP5 309 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 WSB1Q9Y6I7 421 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 MTORP42345 2549 aa8.73□□□□□ -1.01
TMEM260-208ENST00000555905 CGB1A6NKQ9 187 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 TEX22C9J3V5 150 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 E7EUB6 86 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 INS-IGF2F8WCM5 200 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 H0YIZ8 118 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 TCF21O43680 179 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 IGHG2P01859 326 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 CRYBA1P05813 215 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 RNASE1P07998 156 aaKnown RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 OR13C7P0DN81 318 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 NUP62P37198 522 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 SNCAP37840 140 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 VDAC2P45880 294 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 RPL15P61313 204 aaKnown RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 NDPQ00604 133 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 TMEM267Q0VDI3 215 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 ARSJQ5FYB0 599 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 ZNF546Q86UE3 836 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 INO80EQ8NBZ0 244 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-208ENST00000555905 SGMS2Q8NHU3 365 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 PSENENQ9NZ42 101 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 U3KQ87 197 aa8.72□□□□□ -1.01
TMEM260-208ENST00000555905 ZFHX3Q15911 3703 aa8.71□□□□□ -1.01
TMEM260-208ENST00000555905 A0A1B0GW64 132 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 IGLC7A0M8Q6 106 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 G3V3Q6 166 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 AP4M1O00189 453 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 ATP6V0E1O15342 81 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 TSC22D2O75157 780 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 IFNA10P01566 189 aa8.71□□□□□ -1.02
TMEM260-208ENST00000555905 APELAP0DMC3 54 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms