RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 AADACL3Q5VUY0 350 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 LCN12Q6JVE5 192 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 DHRS11Q6UWP2 260 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 CLEC19AQ6UXS0 136 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 UNQ9165/PRO28630Q6UXU0 137 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 SLC25A42Q86VD7 318 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 LYSMD2Q8IV50 215 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 SGPP2Q8IWX5 399 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 OR4A5Q8NH83 315 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 GPX8Q8TED1 209 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 CITED4Q96RK1 184 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF2Q9BSG1 426 aaPredicted RBP7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 NAA50Q9GZZ1 169 aaKnown RBP7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 PLEKHA3Q9HB20 300 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 IFT46Q9NQC8 304 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 GAR1Q9NY12 217 aaKnown RBP7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 COMMD9Q9P000 198 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 VPS13DQ5THJ4 4388 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 DNAH10Q8IVF4 4471 aa7.01□□□□□ -1.29
VIPAS39-207ENST00000555854 DBX1A6NMT0 343 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 MARCH11A6NNE9 402 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 F8W735 103 aaPredicted RBP7□□□□□ -1.29
VIPAS39-207ENST00000555854 LGALS9O00182 355 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 PGLYRP1O75594 196 aaPredicted RBP7□□□□□ -1.29
VIPAS39-207ENST00000555854 FOLR2P14207 255 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 S100A5P33763 92 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 HRH1P35367 487 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 ARL3P36405 182 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 HERV-K104P61576 105 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 VBP1P61758 197 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 CATR1Q13166 79 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 RGS21Q2M5E4 152 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 DEFB114Q30KQ6 69 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 OR10W1Q8NGF6 305 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 OR2K2Q8NGT1 345 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 ZNF502Q8TBZ5 544 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 DYNC2LI1Q8TCX1 351 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 WDR89Q96FK6 387 aaPredicted RBP7□□□□□ -1.29
VIPAS39-207ENST00000555854 PLEKHA2Q9HB19 425 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 HRASLSQ9HDD0 168 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 CCDC59Q9P031 241 aaKnown RBP7□□□□□ -1.29
VIPAS39-207ENST00000555854 PEMTQ9UBM1 199 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 MLXQ9UH92 298 aa7□□□□□ -1.29
VIPAS39-207ENST00000555854 FRAS1Q86XX4 4008 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 RBMY1BA6NDE4 496 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 RBMY1EA6NEQ0 496 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 GGCTO75223 188 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 IGKV1-39P01597 117 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 IGKV1D-39P04432 117 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 FGF2P09038 288 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 RBMY1DP0C7P1 496 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 F2RP25116 425 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 HLA-DMAP28067 261 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 GPR183P32249 361 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 PPP5CP53041 499 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 TAS2R46P59540 309 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 CD81P60033 236 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 FAM209BQ5JX69 171 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 GPHB5Q86YW7 130 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 TMEM61Q8N0U2 210 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 DEFB125Q8N687 156 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 GDPD1Q8N9F7 314 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 OR5H2Q8NGV7 314 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 FCAMRQ8WWV6 532 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 EEF1AKMT3Q96AZ1 226 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 S100A16Q96FQ6 103 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 QTRT1Q9BXR0 403 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 NXF2Q9GZY0 626 aaKnown RBP6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 ZMAT4Q9H898 229 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 COMMD3Q9UBI1 195 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 NSG2Q9Y328 171 aa6.99□□□□□ -1.29
VIPAS39-207ENST00000555854 TEX50A0A1B0GTY4 177 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 HPGDSO60760 199 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 APOA1P02647 267 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 HIST1H1BP16401 226 aaKnown RBP6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 ELK1P19419 428 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 CBLN1P23435 193 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 PRSS3P35030 304 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 G6PCP35575 357 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 LPAR6P43657 344 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 SPCS2Q15005 226 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 TATDN3Q17R31 274 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 BTNL8Q6UX41 500 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 GTSCR1Q86UQ5 136 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 SNX29P2Q8IUI4 249 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 LAX1Q8IWV1 398 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 DMBX1Q8NFW5 382 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 MCFD2Q8NI22 146 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 DYNLRB2Q8TF09 96 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 FAM110AQ9BQ89 295 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 NEURL2Q9BR09 285 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 SRSF8Q9BRL6 282 aaKnown RBP6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 HIPK2Q9H2X6 1198 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 NDUFA4L2Q9NRX3 87 aa6.98□□□□□ -1.29
VIPAS39-207ENST00000555854 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 IGHV3-35A0A0C4DH35 117 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 K7EIM0 57 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 GPR31O00270 319 aa6.97□□□□□ -1.29
VIPAS39-207ENST00000555854 CLEC3BP05452 202 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms