RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 C14orf166Q9Y224 244 aaKnown RBP11.11□□□□□ -0.63
SHMT2-217ENST00000555116 NOTCH3Q9UM47 2321 aa11.11□□□□□ -0.63
SHMT2-217ENST00000555116 CTSDP07339 412 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-217ENST00000555116 SLC25A4P12235 298 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 GNB1P62873 340 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 PHLDA2Q53GA4 152 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 CXorf66Q5JRM2 361 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-217ENST00000555116 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 ZNF546Q86UE3 836 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 CMTM1Q8IZ96 169 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 SLC38A6Q8IZM9 456 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 PUSL1Q8N0Z8 303 aaKnown RBP11.1□□□□□ -0.63
SHMT2-217ENST00000555116 OR4F17Q8NGA8 305 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 R3HDM4Q96D70 268 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 OR4F4Q96R69 305 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 COMMD9Q9P000 198 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 UBQLN2Q9UHD9 624 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 LINC00862A6NCI5 91 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 SOX15O60248 233 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 CNIH1O95406 144 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 HRASP01112 189 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 TMEM267Q0VDI3 215 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-217ENST00000555116 AKIRIN2Q53H80 203 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 C11orf87Q6NUJ2 197 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 GSG1LQ6UXU4 331 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 LFNGQ8NES3 379 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 COQ8AQ8NI60 647 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 MYOZ3Q8TDC0 251 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 CD300LFQ8TDQ1 290 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 RHOVQ96L33 236 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 KLK15Q9H2R5 256 aa11.1□□□□□ -0.63
SHMT2-217ENST00000555116 ZNF430Q9H8G1 570 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-217ENST00000555116 FOXA2Q9Y261 457 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-217ENST00000555116 C13orf42A0A1B0GVH6 325 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 C5orf51A6NDU8 294 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 HPRT1P00492 218 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 F2RP25116 425 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-217ENST00000555116 POU2AF1Q16633 256 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 LRRC37A5PQ49AS3 106 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 UNQ5815/PRO19632Q6UWF5 114 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 TCTEX1D1Q8N7M0 179 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 TMEM167AQ8TBQ9 72 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 PLEKHA2Q9HB19 425 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 PRR13Q9NZ81 148 aa11.09□□□□□ -0.63
SHMT2-217ENST00000555116 A0A1W2PN81 502 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 KBTBD11O94819 623 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 S1PR2O95136 353 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 CHRNA7P36544 502 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 ZNF585BQ52M93 769 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 ASPHD1Q5U4P2 390 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 MMD2Q8IY49 270 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 NMES1Q9C002 83 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 TNFSF18Q9UNG2 199 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 RPS10-NUDT3A0A1W2PQS6 291 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 CRYM-AS1A6NIL9 109 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 ADAP1O75689 374 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 PSMB6P28072 239 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 RND3P61587 244 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 CYCSP99999 105 aaKnown RBP11.08□□□□□ -0.64
SHMT2-217ENST00000555116 TNXAQ16473 311 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 TBC1D26Q86UD7 250 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 ZNF695Q8IW36 515 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 SLC2A9Q9NRM0 540 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 BET1LQ9NYM9 111 aa11.08□□□□□ -0.64
SHMT2-217ENST00000555116 A0A0D9SG52 128 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 IL6RP08887 468 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-217ENST00000555116 PF4V1P10720 104 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 NQO2P16083 231 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 S100GP29377 79 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 LPAR6P43657 344 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 CDX1P47902 265 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-217ENST00000555116 CLLU1Q5K131 121 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 OR4A47Q6IF82 309 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 ETV3LQ6ZN32 361 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 SGPP2Q8IWX5 399 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
SHMT2-217ENST00000555116 AIFM2Q9BRQ8 373 aa11.07□□□□□ -0.64
SHMT2-217ENST00000555116 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 NUDT19A8MXV4 375 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 RAB9AP51151 201 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 ZNF345Q14585 488 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 C10orf55Q5SWW7 151 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 C8orf86Q6ZUL3 223 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 ACOT7LQ6ZUV0 252 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 THAP6Q8TBB0 222 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 TMEM68Q96MH6 324 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 FAM212BQ9NTI7 297 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-217ENST00000555116 TEX13DA0A0J9YY54 714 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-217ENST00000555116 RNF222A6NCQ9 220 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 MPPED1O15442 326 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms