RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CTXN2P0C2S0 81 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 OR8U8P0C7N1 319 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 SAA1P0DJI8 122 aaPredicted RBP3.17□□□□□ -1.9
VTI1B-203ENST00000554636 SMIM18P0DKX4 95 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 RRASP10301 218 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 PTHLHP12272 177 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 NFYAP23511 347 aaPredicted RBP3.17□□□□□ -1.9
VTI1B-203ENST00000554636 TALDO1P37837 337 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 LGALS7P47929 136 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 TPPP2P59282 170 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 UBE2KP61086 200 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 RPL30P62888 115 aaKnown RBP3.17□□□□□ -1.9
VTI1B-203ENST00000554636 PITPNAQ00169 270 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 DEFA5Q01523 94 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 PJVKQ0ZLH3 352 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 FXYD3Q14802 87 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 RTL8BQ17RB0 113 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 AKIRIN2Q53H80 203 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 ACTBL2Q562R1 376 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 IDNKQ5T6J7 187 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 PYHIN1Q6K0P9 492 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 CNIH2Q6PI25 160 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 HOGA1Q86XE5 327 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 GVQW1Q8N7I0 195 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 POC5Q8NA72 575 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 GRPEL2Q8TAA5 225 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 DCUN1D4Q92564 292 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 SNAPC3Q92966 411 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 ADTRPQ96IZ2 230 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 UHRF2Q96PU4 802 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 ST6GALNAC5Q9BVH7 336 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 CSTL1Q9H114 145 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 DCSTAMPQ9H295 470 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 AUNIPQ9H7T9 357 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 ANXA10Q9UJ72 324 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 ANAPC10Q9UM13 185 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 SPATA2Q9UM82 520 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 RBMX2Q9Y388 322 aaKnown RBP3.17□□□□□ -1.9
VTI1B-203ENST00000554636 OR2W1Q9Y3N9 320 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 LSM4Q9Y4Z0 139 aaKnown RBP3.17□□□□□ -1.9
VTI1B-203ENST00000554636 ALMS1Q8TCU4 4167 aa3.17□□□□□ -1.9
VTI1B-203ENST00000554636 COL7A1Q02388 2944 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TRAV18A0A075B6X5 111 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 A0A087WXM4 84 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 A0A1B0GW64 132 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 LINC01619G3V211 115 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 OVOL1O14753 267 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 AIREO43918 545 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 RAMP3O60896 148 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 FCGR3BO75015 233 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TNFAIP8O95379 198 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 PPYP01298 95 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TRBV12-3P01733 135 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 HSPB1P04792 205 aaKnown RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 FCER2P06734 321 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 AADACP22760 399 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TAS2R20P59543 309 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 NCS1P62166 190 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 ZNF45Q02386 682 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 RELQ04864 619 aaPredicted RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TMEM267Q0VDI3 215 aaPredicted RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 CBX3Q13185 183 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 CDK10Q15131 360 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 MSMO1Q15800 293 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 CTF1Q16619 201 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 PRSS8Q16651 343 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 VMA21Q3ZAQ7 101 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TIMM50Q3ZCQ8 353 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 OR2B11Q5JQS5 317 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 UBE2NLQ5JXB2 153 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 C10orf55Q5SWW7 151 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 IDO2Q6ZQW0 420 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 KCTD9Q7L273 389 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 ADAD2Q8NCV1 583 aaKnown RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 BEST4Q8NFU0 473 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TSPAN14Q8NG11 270 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 OR5T1Q8NG75 326 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 OR13F1Q8NGS4 319 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 DLX4Q92988 240 aaPredicted RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 TMEM68Q96MH6 324 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 MS4A10Q96PG2 267 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 HSD17B10Q99714 261 aaKnown RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 B9D2Q9BPU9 175 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 FXYD6Q9H0Q3 95 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 SLA2Q9H6Q3 261 aa3.16□□□□□ -1.9
VTI1B-203ENST00000554636 MRPS7Q9Y2R9 242 aaKnown RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 RBM7Q9Y580 266 aaKnown RBP3.16□□□□□ -1.9
VTI1B-203ENST00000554636 MEIS3P1A6NDR6 274 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TEX22C9J3V5 150 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 E7EUB6 86 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TNFSF12O43508 249 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 XRCC3O43542 346 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 SLC22A5O76082 557 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 CNIH1O95406 144 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 PRH1P02810 166 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 TRGV3P03979 118 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 EIF4EP06730 217 aaKnown RBP3.15□□□□□ -1.91
VTI1B-203ENST00000554636 OR9G9P0C7N8 305 aa3.15□□□□□ -1.91
VTI1B-203ENST00000554636 APELAP0DMC3 54 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms