RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 UBA52P62987 128 aaKnown RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 ERHP84090 104 aaKnown RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 TMEM267Q0VDI3 215 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 RAB32Q13637 225 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 LRRC37A5PQ49AS3 106 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 ARSJQ5FYB0 599 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 SGMS2Q8NHU3 365 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 GRPEL2Q8TAA5 225 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 HINT2Q9BX68 163 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 GON7Q9BXV9 100 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 TNFRSF19Q9NS68 423 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 LSM5Q9Y4Y9 91 aaKnown RBP11.5□□□□□ -0.57
SHMT2-210ENST00000553950 WSB1Q9Y6I7 421 aa11.5□□□□□ -0.57
SHMT2-210ENST00000553950 E5RGE8 158 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 AP4M1O00189 453 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 TSC22D2O75157 780 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 MPC2O95563 127 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 AMY1AP04745 511 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 PJVKQ0ZLH3 352 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 MRGPRG-AS1Q2M3A8 158 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 CXorf66Q5JRM2 361 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-210ENST00000553950 C9orf152Q5JTZ5 239 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 PRSS54Q6PEW0 395 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 OR1L6Q8NGR2 347 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 RBKSQ9H477 322 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 RANGRFQ9HD47 186 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-210ENST00000553950 HEYLQ9NQ87 328 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-210ENST00000553950 PARP11Q9NR21 331 aa11.49□□□□□ -0.57
SHMT2-210ENST00000553950 RCL1Q9Y2P8 373 aaKnown RBP11.49□□□□□ -0.57
SHMT2-210ENST00000553950 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
SHMT2-210ENST00000553950 ANK3Q12955 4377 aaKnown RBP11.48□□□□□ -0.57
SHMT2-210ENST00000553950 NXPH3O95157 252 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 IGF1P05019 195 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 NUP62P37198 522 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-210ENST00000553950 HTR2BP41595 481 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-210ENST00000553950 POLR2GP62487 172 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-210ENST00000553950 C10orf55Q5SWW7 151 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 C11orf87Q6NUJ2 197 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 ZNF114Q8NC26 417 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 RBMXL1Q96E39 390 aaKnown RBP11.48□□□□□ -0.57
SHMT2-210ENST00000553950 ST6GAL2Q96JF0 529 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 HSPB9Q9BQS6 159 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 ESM1Q9NQ30 184 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 U3KQ87 197 aa11.48□□□□□ -0.57
SHMT2-210ENST00000553950 NPIPB5A8MRT5 1133 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 CORTO00230 105 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 FCN1O00602 326 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 ATP6V0E1O15342 81 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 SNCAP37840 140 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 P2RY1P47900 373 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 NDPQ00604 133 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 AKIRIN2Q53H80 203 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 Q8N2B8 174 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 SLC24A4Q8NFF2 622 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 OR2T6Q8NHC8 308 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 PPP1R14BQ96C90 147 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 SMIM8Q96KF7 97 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 MAGT1Q9H0U3 335 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 MBD2Q9UBB5 411 aa11.47□□□□□ -0.57
SHMT2-210ENST00000553950 IGLC7A0M8Q6 106 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 MSGN1A6NI15 193 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 TEX22C9J3V5 150 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 C1QBP02746 253 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 OPN1MWP04001 364 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 OPN1MW2P0DN77 364 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 OPN1MW3P0DN78 364 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 SLC25A4P12235 298 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 LYL1P12980 280 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 NPY1RP25929 384 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-210ENST00000553950 RAB11AP62491 216 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 SSBP2P81877 361 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-210ENST00000553950 ZFP69Q49AA0 526 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 STX12Q86Y82 276 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 OR2C3Q8N628 320 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 DCUN1D4Q92564 292 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 DUX5Q96PT3 197 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 SLC25A31Q9H0C2 315 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 LYRM2Q9NU23 88 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-210ENST00000553950 PSENENQ9NZ42 101 aa11.46□□□□□ -0.57
SHMT2-210ENST00000553950 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.57
SHMT2-210ENST00000553950 TRAV41A0A0B4J266 112 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 FAM181BA6NEQ2 426 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 H3BUA1 57 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 IFNA10P01566 189 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 OR13C7P0DN81 318 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 IAPPP10997 89 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 CAV2P51636 162 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 SLC35B1P78383 322 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 BAXQ07812 192 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 ECSCRQ19T08 205 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 SPINK9Q5DT21 86 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 UNQ5815/PRO19632Q6UWF5 114 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 INO80EQ8NBZ0 244 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-210ENST00000553950 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-210ENST00000553950 NEURL2Q9BR09 285 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 ZNF702PQ9H963 129 aa11.45□□□□□ -0.58
SHMT2-210ENST00000553950 MXRA5Q9NR99 2828 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 FXYD6-FXYD2A0A087WZ82 144 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms