RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 C8orf46Q8TAG6 207 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 LHX4Q969G2 390 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 FLYWCH2Q96CP2 140 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 CLEC7AQ9BXN2 247 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 RPRMQ9NS64 109 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 LIPFP07098 398 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 FGF7P21781 194 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 SNCAP37840 140 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 HSPE1P61604 102 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 GUCA2BQ16661 112 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 SPSB3Q6PJ21 355 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF843Q8N446 348 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 OR4P4Q8NGL7 312 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 SCRT1Q9BWW7 348 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 LOC105371242A0A075B767 164 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 TEX50A0A1B0GTY4 177 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 SMCO3A2RU48 225 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 RNASEK-C17orf49H0YIS7 233 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 BUB1B-PAK6H3BSN5 160 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 IGKV1D-33P01593 117 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 IGKV1-33P01594 117 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 IGLV2-23P01705 113 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 HNF1AP20823 631 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 LCN2P80188 198 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF726P1Q15940 193 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 C8orf31Q8N9H6 132 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 OR52E5Q8NH55 327 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 RARRES2Q99969 163 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 BPESC1Q9GZL8 116 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 UQCC1Q9NVA1 299 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 MLXQ9UH92 298 aa10.3□□□□□ -0.76
VIPAS39-206ENST00000553888 TCAPO15273 167 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 KBTBD11O94819 623 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 OR8U8P0C7N1 319 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF137PP52743 207 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 EFNA4P52798 201 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 TAS2R60P59551 318 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 DHRS7BQ6IAN0 325 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 ACSM6Q6P461 480 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 ETV3LQ6ZN32 361 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 PUSL1Q8N0Z8 303 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 SFT2D1Q8WV19 159 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 NRGNQ92686 78 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 WASHC3Q9Y3C0 194 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 FBN2P35556 2912 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 HMGB3O15347 200 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 LY86O95711 162 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 CA2P00918 260 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 RAB5CP51148 216 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 RAB2AP61019 212 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 AKIRIN2Q53H80 203 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 TMEM177Q53S58 311 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 UQCC3Q6UW78 93 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 MOB3BQ86TA1 216 aa10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 OSR1Q8TAX0 266 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 UBR5O95071 2799 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-206ENST00000553888 IGHV4-39P01824 125 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 CD24P25063 80 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 PDLIM3Q53GG5 364 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 FBLN7Q53RD9 439 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 LHFPL4Q7Z7J7 247 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 OR4C13Q8NGP0 309 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 UMAD1C9J7I0 102 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 IFNA4P05014 189 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 H2AFB1P0C5Y9 115 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 SRSF1Q07955 248 aaKnown RBP eCLIP10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 CLCC1Q96S66 551 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 EIF5A2Q9GZV4 153 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 BET1LQ9NYM9 111 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 HILPDAQ9Y5L2 63 aa10.28□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A0U1RQK1 487 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 A0A1B0GW64 132 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF320A2RRD8 509 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 FAM157AC9JC47 383 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 CD5P06127 495 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 SFTA3P0C7M3 94 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 APELAP0DMC3 54 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 PRRX1P54821 245 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 FLI1Q01543 452 aaPredicted RBP10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 BTN1A1Q13410 526 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 GUK1Q16774 197 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 HCP5Q6MZN7 132 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 LCN15Q6UWW0 184 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 PDPNQ86YL7 162 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 SLC24A4Q8NFF2 622 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 PINX1Q96BK5 328 aaKnown RBP10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 ZNF430Q9H8G1 570 aaPredicted RBP10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 LPAR2Q9HBW0 351 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 PRNDQ9UKY0 176 aa10.27□□□□□ -0.76
VIPAS39-206ENST00000553888 A1L4Q6 167 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 CGB1A6NKQ9 187 aa10.27□□□□□ -0.77
VIPAS39-206ENST00000553888 OVOL3O00110 214 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms