RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
NEK3-204ENST00000552973 PMP2P02689 132 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 TRAPPC2P0DI81 140 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 TRAPPC2BP0DI82 140 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 GNRHRP30968 328 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 TGFBR1P36897 503 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 RFX2P48378 723 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 HERV-K104P61576 105 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 EWSR1Q01844 656 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEK3-204ENST00000552973 WT1-ASQ06250 92 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 NEDD8Q15843 81 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 POU2AF1Q16633 256 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 SLC38A6Q8IZM9 456 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 OR2C3Q8N628 320 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 UBAC2Q8NBM4 344 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 C20orf24Q9BUV8 137 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 ZNF436Q9C0F3 470 aaPredicted RBP8.54□□□□□ -1.04
NEK3-204ENST00000552973 PLEKHA2Q9HB19 425 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 EHFQ9NZC4 300 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 PLECQ15149 4684 aaKnown RBP8.54□□□□□ -1.04
NEK3-204ENST00000552973 CSMD3Q7Z407 3707 aa8.54□□□□□ -1.04
NEK3-204ENST00000552973 PGLYRP1O75594 196 aaPredicted RBP8.53□□□□□ -1.04
NEK3-204ENST00000552973 ATP6V1G2O95670 118 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 LY6G6CO95867 125 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 KRASP01116 189 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 RLN1P04808 185 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 SERPINE2P07093 398 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 LPAR6P43657 344 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 MFAP2P55001 183 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 SCAND1P57086 179 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 ERVK-16P61578 105 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 DEFB135Q30KP9 77 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 GDPD1Q8N9F7 314 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 VN1R17PQ8TDU5 208 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 SCARB1Q8WTV0 552 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 FCAMRQ8WWV6 532 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 TMEM190Q8WZ59 177 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 SRSF8Q9BRL6 282 aaKnown RBP8.53□□□□□ -1.04
NEK3-204ENST00000552973 ZNF2Q9BSG1 426 aaPredicted RBP8.53□□□□□ -1.04
NEK3-204ENST00000552973 CHRDL1Q9BU40 450 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 YTHDF1Q9BYJ9 559 aaKnown RBP8.53□□□□□ -1.04
NEK3-204ENST00000552973 C5orf66Q9H5L9 145 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 IFT46Q9NQC8 304 aa8.53□□□□□ -1.04
NEK3-204ENST00000552973 A0A0A6YYH2 397 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 A6NJ64 397 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 SPRY2O43597 315 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 RPL35AP18077 110 aaKnown RBP8.52□□□□□ -1.05
NEK3-204ENST00000552973 G6PCP35575 357 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 CBX5P45973 191 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 ELLP55199 621 aaPredicted RBP8.52□□□□□ -1.05
NEK3-204ENST00000552973 Q56UQ5 140 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 LYG2Q86SG7 212 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 OR1L8Q8NGR8 309 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 CD300LFQ8TDQ1 290 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 LINC00476Q8WZB0 136 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 SPAG8Q99932 426 aaPredicted RBP8.52□□□□□ -1.05
NEK3-204ENST00000552973 Q9H521 79 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 C21orf62Q9NYP8 219 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 OR51B2Q9Y5P1 312 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 LYSTQ99698 3801 aa8.52□□□□□ -1.05
NEK3-204ENST00000552973 DBX1A6NMT0 343 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 MARCH11A6NNE9 402 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 TSPAN4O14817 238 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 CYB5BO43169 146 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 XRCC3O43542 346 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 CTSDP07339 412 aaPredicted RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 F2RP25116 425 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 ADMP35318 185 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 APOC4P55056 127 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 LAMTOR1Q6IAA8 161 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 DHRS11Q6UWP2 260 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 TSPAN14Q8NG11 270 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 OR5B3Q8NH48 314 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 LSM10Q969L4 123 aaKnown RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 MOB3AQ96BX8 217 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 S100A16Q96FQ6 103 aaKnown RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 BSCL2Q96G97 398 aaPredicted RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 DAZ1Q9NQZ3 744 aaKnown RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 NDUFA4L2Q9NRX3 87 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 COMMD9Q9P000 198 aa8.51□□□□□ -1.05
NEK3-204ENST00000552973 F11RQ9Y624 299 aaKnown RBP8.51□□□□□ -1.05
NEK3-204ENST00000552973 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 IGHV3-49A0A0A0MS15 119 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
NEK3-204ENST00000552973 K7EIM0 57 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 NDUFA4O00483 81 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 SNAPC5O75971 98 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 BMI1P35226 326 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 TFPI2P48307 235 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 TAS2R20P59543 309 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 LSM3P62310 102 aaKnown RBP8.5□□□□□ -1.05
NEK3-204ENST00000552973 ZNF124Q15973 351 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 PHLDA2Q53GA4 152 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
NEK3-204ENST00000552973 Q6ZWC4 215 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 HSD17B13Q7Z5P4 300 aaPredicted RBP8.5□□□□□ -1.05
NEK3-204ENST00000552973 APRG1Q8IVJ8 170 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms