RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 PDLIM3Q53GG5 364 aaPredicted RBP4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 MBNL2Q5VZF2 373 aaKnown RBP4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF788Q6ZQV5 615 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 SHISA6Q6ZSJ9 500 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 SYT13Q7L8C5 426 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 OSR2Q8N2R0 312 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 OR4X2Q8NGF9 303 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 OR9G4Q8NGQ1 327 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 OR4A16Q8NH70 328 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 ATP6V0E2Q8NHE4 81 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 LRRC29Q8WV35 223 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 RNF138Q8WVD3 245 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 GTSF1Q8WW33 167 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 BADQ92934 168 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM54Q969K7 222 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 ST6GALNAC6Q969X2 333 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 PERPQ96FX8 193 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 C5orf30Q96GV9 206 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 IGF2BP2-AS1Q96M15 143 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 C18orf15Q96N68 181 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 VGLL1Q99990 258 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 TMEM191AQ9H0A3 160 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 SAP30LQ9HAJ7 183 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 ALKBH4Q9NXW9 302 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 WNT16Q9UBV4 365 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 CACNG5Q9UF02 275 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 TRAPPC2LQ9UL33 140 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 NPIPA1Q9UND3 350 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 LOXL2Q9Y4K0 774 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 YTHDF2Q9Y5A9 579 aaKnown RBP4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 SPCS1Q9Y6A9 102 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 SHANK1Q9Y566 2161 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 CACNA1IQ9P0X4 2223 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 ARID1AO14497 2285 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 OBSL1O75147 1896 aa4.35□□□□□ -1.71
LSM3P2-201ENST00000551246 PRSS46E5RG02 174 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 J3QR89 54 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 TNFSF11O14788 317 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 HMGB3O15347 200 aaKnown RBP4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 DHHO43323 396 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 HSBP1O75506 76 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 CXorf1O96002 111 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 IGKV3-11P04433 115 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 NHLRC4P0CG21 123 aaPredicted RBP4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 HIST1H1EP10412 219 aaKnown RBP4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 IAPPP10997 89 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 IL11P20809 199 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 OPRK1P41145 380 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 HERV-K104P63124 156 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 TLE1Q04724 770 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 TFF3Q07654 80 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 KLRD1Q13241 179 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 MFAP5Q13361 173 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 GABRA6Q16445 453 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 NRN1LQ496H8 165 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 SLC25A53Q5H9E4 307 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 TIMM23BQ5SRD1 257 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 SPATA46Q5T0L3 261 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 CXCL17Q6UXB2 119 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 ATP5L2Q7Z4Y8 100 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 PIP4P1Q86T03 277 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 DOLPP1Q86YN1 238 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 ZDHHC23Q8IYP9 409 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF441Q8N8Z8 693 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 GATSQ8NAP1 163 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 C8orf46Q8TAG6 207 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 ZNF502Q8TBZ5 544 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 RNF183Q96D59 192 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 WWC2-AS2Q96NR7 200 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 SH2D2AQ9NP31 389 aa4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 HEYLQ9NQ87 328 aaPredicted RBP4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 SLC25A10Q9UBX3 287 aaPredicted RBP4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 MUC22E2RYF6 1773 aaPredicted RBP4.34□□□□□ -1.71
LSM3P2-201ENST00000551246 IGHV1-24A0A0C4DH33 117 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 KIR2DS1A0A191URI9 304 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 EDDM13A0A1B0GTR0 161 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1W2PRD5 423 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1W2PRF3 423 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 A0A1W2PRM7 423 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 OVOL3O00110 214 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 RER1O15258 196 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 ZNF207O43670 478 aaKnown RBP4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 MPDU1O75352 247 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 P04436 131 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 SCTP09683 121 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 LINC00271P0C7V0 271 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 FABP2P12104 132 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 PVRP15151 417 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 NTF3P20783 257 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 CRYGSP22914 178 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 GCHFRP30047 84 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 KIR2DS4P43632 304 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 FASLGP48023 281 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 RBM11P57052 281 aaKnown RBP4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 RPL31P62899 125 aaKnown RBP4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 PMP22Q01453 160 aa4.33□□□□□ -1.72
LSM3P2-201ENST00000551246 MALLQ13021 153 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms