RNA–Protein interactions for RNA: ENST00000550880.5

PFDN5-212, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-212ENST00000550880 ZNF124Q15973 351 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 Q56UQ5 140 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 CNIH2Q6PI25 160 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 SPAG16Q8N0X2 631 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 GDPD1Q8N9F7 314 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 TMEM116Q8NCL8 245 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 RNF2Q99496 336 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 ATG5Q9H1Y0 275 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 ACOT13Q9NPJ3 140 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 SMPXQ9UHP9 88 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 LSM2Q9Y333 95 aaKnown RBP8.1□□□□□ -1.11
PFDN5-212ENST00000550880 ETV7Q9Y603 341 aa8.1□□□□□ -1.11
PFDN5-212ENST00000550880 IGKV3-7A0A075B6H7 116 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 IGHV4-4A0A075B6R2 117 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 IGHV3OR16-8A0A075B7F1 116 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 TRAV10A0A0B4J240 114 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 IGKV1D-13A0A0B4J2D9 117 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 IGHV7-4-1A0A0J9YVY3 117 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 C15orf61A6NNL5 157 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 UPK2O00526 184 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 CHEK1O14757 476 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 RBFOX2O43251 390 aaKnown RBP eCLIP8.09□□□□□ -1.116e-14■■□□□ 14.5
PFDN5-212ENST00000550880 TNFSF12O43508 249 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 YIF1AO95070 293 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 HPRT1P00492 218 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 SERPINE2P07093 398 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 FGF2P09038 288 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 TRAPPC2P0DI81 140 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 TRAPPC2BP0DI82 140 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 IGKV1-13P0DP09 117 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 NQO2P16083 231 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 BRWD1-AS2P59051 145 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 CATR1Q13166 79 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 EIF4EBP1Q13541 118 aaPredicted RBP8.09□□□□□ -1.11
PFDN5-212ENST00000550880 CDNFQ49AH0 187 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 HACD4Q5VWC8 232 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 PVRIGQ6DKI7 326 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 ZBTB34Q8NCN2 500 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 DMBX1Q8NFW5 382 aa8.09□□□□□ -1.11
PFDN5-212ENST00000550880 PKHD1P08F94 4074 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 TRAV14DV4A0A0A6YYC5 116 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 IFITM5A6NNB3 132 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 DNASE2O00115 360 aaPredicted RBP8.08□□□□□ -1.12
PFDN5-212ENST00000550880 NUPL2O15504 423 aaKnown RBP8.08□□□□□ -1.12
PFDN5-212ENST00000550880 DFFBO76075 338 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 EIF4EP06730 217 aaKnown RBP8.08□□□□□ -1.12
PFDN5-212ENST00000550880 P0DMU3 169 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 FAM231AP0DMU4 169 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 FAM231CP0DMU5 169 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 HLA-DMBP28068 263 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 ARPC4P59998 168 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 MSMO1Q15800 293 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 TMEM41BQ5BJD5 291 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 STHQ8IWL8 128 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 GBGT1Q8N5D6 347 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 OR10W1Q8NGF6 305 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 SCARB1Q8WTV0 552 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 SECTM1Q8WVN6 248 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 CHRDL1Q9BU40 450 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 RNF126Q9BV68 326 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 ANXA10Q9UJ72 324 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
PFDN5-212ENST00000550880 IGHV3-21A0A0B4J1V1 117 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 SULT1C2O00338 296 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 MIFP14174 115 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 MYL9P24844 172 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 GNG2P59768 71 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 ERVK-16P61578 105 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 FABP5Q01469 135 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 MLLT11Q13015 90 aaPredicted RBP8.07□□□□□ -1.12
PFDN5-212ENST00000550880 RCN1Q15293 331 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 POU2AF1Q16633 256 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 POM121L12Q8N7R1 296 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 OR1L8Q8NGR8 309 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 LSM10Q969L4 123 aaKnown RBP8.07□□□□□ -1.12
PFDN5-212ENST00000550880 GPHA2Q96T91 129 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 HINT2Q9BX68 163 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 VCXQ9H320 206 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 CCL28Q9NRJ3 127 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 TMEM140Q9NV12 185 aa8.07□□□□□ -1.12
PFDN5-212ENST00000550880 ELF5Q9UKW6 265 aaPredicted RBP8.07□□□□□ -1.12
PFDN5-212ENST00000550880 F11RQ9Y624 299 aaKnown RBP8.07□□□□□ -1.12
PFDN5-212ENST00000550880 DNAH2Q9P225 4427 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 IGHV3-49A0A0A0MS15 119 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 TRAV1-2A0A0B4J238 106 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 TRAV3A0A0B4J244 114 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 IGHV4-28A0A0C4DH34 117 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 CASQ2O14958 399 aaPredicted RBP8.06□□□□□ -1.12
PFDN5-212ENST00000550880 SCGNO76038 276 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 RAB3BP20337 219 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 OR10A3P58181 314 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 RPL11P62913 178 aaKnown RBP8.06□□□□□ -1.12
PFDN5-212ENST00000550880 WT1-ASQ06250 92 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 Q6ZTC4 211 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 TCF24Q7RTU0 167 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 Q8NAQ8 132 aa8.06□□□□□ -1.12
PFDN5-212ENST00000550880 DGCR14Q96DF8 476 aaKnown RBP8.06□□□□□ -1.12
PFDN5-212ENST00000550880 GINS3Q9BRX5 216 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms