RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 MFSD2BA6NFX1 497 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 CGB1A6NKQ9 187 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 CYB5BO43169 146 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 CLEC3BP05452 202 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 TAS2R31P59538 309 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 ARPC4P59998 168 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 CATR1Q13166 79 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 THOC7Q6I9Y2 204 aaKnown RBP5.69□□□□□ -1.5
NEK3-201ENST00000550331 SFXN4Q6P4A7 337 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 BTNL8Q6UX41 500 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 SSX9Q7RTT3 188 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 SPAG16Q8N0X2 631 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 BEST4Q8NFU0 473 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 OR1L6Q8NGR2 347 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 ZNF502Q8TBZ5 544 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 LINC00476Q8WZB0 136 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 FCGR1BQ92637 280 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 SPAG8Q99932 426 aaPredicted RBP5.69□□□□□ -1.5
NEK3-201ENST00000550331 C5orf66Q9H5L9 145 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 HRASLSQ9HDD0 168 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 CCL28Q9NRJ3 127 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 TXNL4BQ9NX01 149 aaKnown RBP5.69□□□□□ -1.5
NEK3-201ENST00000550331 RHBDL2Q9NX52 303 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 THYN1Q9P016 225 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 MRPL27Q9P0M9 148 aaKnown RBP5.69□□□□□ -1.5
NEK3-201ENST00000550331 DAPK2Q9UIK4 370 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 TP53TG1Q9Y2A0 90 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 UFC1Q9Y3C8 167 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 ETV7Q9Y603 341 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 S4R3C0 116 aa5.69□□□□□ -1.5
NEK3-201ENST00000550331 A0A0A6YYH2 397 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 IGLC7A0M8Q6 106 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 NUPR2A6NF83 97 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 A6NJ64 397 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 UPK2O00526 184 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 TNFSF12O43508 249 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 SCAF4O95104 1147 aaKnown RBP5.68□□□□□ -1.5
NEK3-201ENST00000550331 LY6G6CO95867 125 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 HPRT1P00492 218 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 PPYP01298 95 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 REG1AP05451 166 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 MYOD1P15172 320 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 NQO2P16083 231 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 PTBP1P26599 531 aaKnown RBP eCLIP5.68□□□□□ -1.5
NEK3-201ENST00000550331 PSMB9P28065 219 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 FCGR2CP31995 323 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 GPR183P32249 361 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 OR2B8PP59922 312 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 TM4SF20Q53R12 229 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 PLET1Q6UQ28 207 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 UNQ9165/PRO28630Q6UXU0 137 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 RBPMS2Q6ZRY4 209 aaKnown RBP5.68□□□□□ -1.5
NEK3-201ENST00000550331 Q6ZWC4 215 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 HSD17B13Q7Z5P4 300 aaPredicted RBP5.68□□□□□ -1.5
NEK3-201ENST00000550331 HOGA1Q86XE5 327 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 SLC38A6Q8IZM9 456 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 SPARTQ8N0X7 666 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 OR2C3Q8N628 320 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 CD300LFQ8TDQ1 290 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 VN1R17PQ8TDU5 208 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 SECTM1Q8WVN6 248 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 TMEM190Q8WZ59 177 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 BORCS5Q969J3 196 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 GPHA2Q96T91 129 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 OVOL2Q9BRP0 275 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 QTRT1Q9BXR0 403 aaKnown RBP5.68□□□□□ -1.5
NEK3-201ENST00000550331 ZNF436Q9C0F3 470 aaPredicted RBP5.68□□□□□ -1.5
NEK3-201ENST00000550331 COMMD5Q9GZQ3 224 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 SLC5A7Q9GZV3 580 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 PLEKHA2Q9HB19 425 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 COMMD9Q9P000 198 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 RAB26Q9ULW5 256 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 SSR3Q9UNL2 185 aa5.68□□□□□ -1.5
NEK3-201ENST00000550331 RRP15Q9Y3B9 282 aaKnown RBP5.68□□□□□ -1.5
NEK3-201ENST00000550331 SULT1C2O00338 296 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 TGOLN2O43493 480 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 TMEM127O75204 238 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 BMI1P35226 326 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 APOC4P55056 127 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 TNFRSF9Q07011 255 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 ZNF585BQ52M93 769 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 SPSB3Q6PJ21 355 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 GVQW1Q8N7I0 195 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 GDPD1Q8N9F7 314 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 DMBX1Q8NFW5 382 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 GIMAP1Q8WWP7 306 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 SLC25A38Q96DW6 304 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 BSCL2Q96G97 398 aaPredicted RBP5.67□□□□□ -1.5
NEK3-201ENST00000550331 ATP6V0BQ99437 205 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 DAZ1Q9NQZ3 744 aaKnown RBP5.67□□□□□ -1.5
NEK3-201ENST00000550331 TMEM140Q9NV12 185 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 SELENOKQ9Y6D0 94 aa5.67□□□□□ -1.5
NEK3-201ENST00000550331 TRAV18A0A075B6X5 111 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 KIR2DL5BA0A0G2JN68 375 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 KIR2DL5BA0A0G2JPC4 375 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 CXorf65A6NEN9 183 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 UBE2CO00762 179 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 TSPAN4O14817 238 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 SPRY2O43597 315 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 SERPINE2P07093 398 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms