RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 COMPP49747 757 aaPredicted RBP7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PPOXP50336 477 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 LCN2P80188 198 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PRR20EP86478 221 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PRR20CP86479 221 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PRR20DP86480 221 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PRR20BP86481 221 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PRR20AP86496 221 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 ARSJQ5FYB0 599 aaPredicted RBP7.3□□□□□ -1.24
TMEM116-209ENST00000550020 MIC13Q5XKP0 118 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 PQLC2Q6ZP29 291 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 Q8N7P7 452 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 TEX45Q8NA69 505 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 C22orf15Q8WYQ4 148 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 NABP2Q9BQ15 211 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 MRPL20Q9BYC9 149 aaKnown RBP7.3□□□□□ -1.24
TMEM116-209ENST00000550020 TMEM133Q9H2Q1 129 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 SRD5A3Q9H8P0 318 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 LY96Q9Y6Y9 160 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 URGCP-MRPS24S4R325 110 aa7.3□□□□□ -1.24
TMEM116-209ENST00000550020 TGIF2-C20orf24A0A0A6YYL0 155 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CORTO00230 105 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CCL21O00585 134 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 ATXN7O15265 892 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 EIF3GO75821 320 aaKnown RBP eCLIP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 MMP23AO75900 390 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 ACTL6BO94805 426 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 IGKV1-16P04430 117 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CXCL1P09341 107 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 ARL14EPLP0DKL9 152 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 IGHV1-8P0DP01 117 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CCL3L1P16619 93 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 HOXA5P20719 270 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CDX1P47902 265 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 FAM3BP58499 235 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 ERVFRD-1P60508 538 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 SELENOTP62341 195 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CD69Q07108 199 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 C16orf82Q7Z2V1 217 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 DMRTC2Q8IXT2 367 aaPredicted RBP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 MUC15Q8N387 334 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 OR1L4Q8NGR5 311 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 GATAD1Q8WUU5 269 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 SSMEM1Q8WWF3 244 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 TIMD4Q96H15 378 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 PFDN5Q99471 154 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 RNF5Q99942 180 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 PYGO2Q9BRQ0 406 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 RAB1BQ9H0U4 201 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 PATZ1Q9HBE1 687 aaKnown RBP7.29□□□□□ -1.24
TMEM116-209ENST00000550020 NDUFA4L2Q9NRX3 87 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 DCAF16Q9NXF7 216 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 MIOXQ9UGB7 285 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 FUT9Q9Y231 359 aa7.29□□□□□ -1.24
TMEM116-209ENST00000550020 CHD3Q12873 2000 aaKnown RBP7.28□□□□□ -1.24
TMEM116-209ENST00000550020 USP34Q70CQ2 3546 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 TRAV9-1A0A075B6T8 112 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 MDFIC2A0A1B0GVS7 189 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 RNASE2P10153 161 aaKnown RBP7.28□□□□□ -1.24
TMEM116-209ENST00000550020 DLX6P56179 175 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 NDUFA6P56556 154 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 BPIFB3P59826 476 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 PRR30Q53SZ7 412 aaPredicted RBP7.28□□□□□ -1.24
TMEM116-209ENST00000550020 ZNF343Q6P1L6 599 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 LYPD2Q6UXB3 125 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 SLC16A13Q7RTY0 426 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 MMD2Q8IY49 270 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 BEND2Q8NDZ0 799 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 OR8B3Q8NGG8 313 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 OR4P4Q8NGL7 312 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 OR2T10Q8NGZ9 312 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 TMEM170AQ8WVE7 144 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 TMEM190Q8WZ59 177 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 ST6GALNAC6Q969X2 333 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 C11orf52Q96A22 123 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 OR8B2Q96RD0 313 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
TMEM116-209ENST00000550020 FAM90A27PA6NNH2 459 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 C9JCJ5 164 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 NDUFB4O95168 129 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 PFN1P07737 140 aaKnown RBP7.27□□□□□ -1.25
TMEM116-209ENST00000550020 IGFBP2P18065 325 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 UBE2G2P60604 165 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 GAMTQ14353 236 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 ZNF672Q499Z4 452 aaPredicted RBP7.27□□□□□ -1.25
TMEM116-209ENST00000550020 FAM78BQ5VT40 261 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 LINC01551Q86U37 167 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 ZCCHC24Q8N2G6 241 aaKnown RBP7.27□□□□□ -1.25
TMEM116-209ENST00000550020 STXBP6Q8NFX7 210 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 OR51G1Q8NGK1 321 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 C8orf46Q8TAG6 207 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 ABHD5Q8WTS1 349 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 NEU4Q8WWR8 484 aaPredicted RBP7.27□□□□□ -1.25
TMEM116-209ENST00000550020 ACY3Q96HD9 319 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 SRSF8Q9BRL6 282 aaKnown RBP7.27□□□□□ -1.25
TMEM116-209ENST00000550020 CLEC7AQ9BXN2 247 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 GAR1Q9NY12 217 aaKnown RBP7.27□□□□□ -1.25
TMEM116-209ENST00000550020 CTSZQ9UBR2 303 aa7.27□□□□□ -1.25
TMEM116-209ENST00000550020 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms