RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 METRNQ9UJH8 293 aa19.08■□□□□ 0.65
NPAS3-206ENST00000548645 ISLRO14498 428 aa19.08■□□□□ 0.64
NPAS3-206ENST00000548645 NPY1RP25929 384 aa19.08■□□□□ 0.64
NPAS3-206ENST00000548645 SLC35B1P78383 322 aa19.08■□□□□ 0.64
NPAS3-206ENST00000548645 CORO2AQ92828 525 aa19.08■□□□□ 0.64
NPAS3-206ENST00000548645 PTPRBP23467 1997 aa19.08■□□□□ 0.64
NPAS3-206ENST00000548645 PTTG1IPP53801 180 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PRR20EP86478 221 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PRR20CP86479 221 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PRR20DP86480 221 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PRR20BP86481 221 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PRR20AP86496 221 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 FXYD3Q14802 87 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PMS2CLQ68D20 193 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 MIR17HGQ75NE6 70 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 S1PR3Q99500 378 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 CXXC4Q9H2H0 198 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 ABI3Q9P2A4 366 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 TCL1AP56279 114 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 TIPARPQ7Z3E1 657 aaKnown RBP19.07■□□□□ 0.64
NPAS3-206ENST00000548645 SLC24A4Q8NFF2 622 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 DCTN5Q9BTE1 182 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 PCSK5Q92824 1860 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 MPV17P39210 176 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 SMIM21Q3B7S5 101 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 KLF14Q8TD94 323 aaPredicted RBP19.07■□□□□ 0.64
NPAS3-206ENST00000548645 WNT10AQ9GZT5 417 aa19.07■□□□□ 0.64
NPAS3-206ENST00000548645 ACTL6BO94805 426 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 MRPL54Q6P161 138 aaKnown RBP19.06■□□□□ 0.64
NPAS3-206ENST00000548645 WDR82Q6UXN9 313 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 TSKUQ8WUA8 353 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 FAM216AQ8WUB2 273 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 TUBG2Q9NRH3 451 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 SLC35D1Q9NTN3 355 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 FAM186AA6NE01 2351 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 PLPPR2Q96GM1 343 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 CDC42EP3Q9UKI2 254 aa19.06■□□□□ 0.64
NPAS3-206ENST00000548645 DMDP11532 3685 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 TMEM265A0A087WTH1 108 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 CA2P00918 260 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 IGFBP2P18065 325 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 KIR2DS2P43631 304 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 MORN2Q502X0 79 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 ZNF439Q8NDP4 499 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 ENY2Q9NPA8 101 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 JPT1Q9UK76 154 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 SMIM27A0A1W2PRY6 76 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 APCSP02743 223 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 EDDM3AQ14507 147 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 PMCHL1Q16048 86 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 IBA57Q5T440 356 aaKnown RBP19.05■□□□□ 0.64
NPAS3-206ENST00000548645 FAM19A2Q8N3H0 131 aa19.05■□□□□ 0.64
NPAS3-206ENST00000548645 MRPS16Q9Y3D3 137 aaKnown RBP19.05■□□□□ 0.64
NPAS3-206ENST00000548645 KLF3P57682 345 aaPredicted RBP19.04■□□□□ 0.64
NPAS3-206ENST00000548645 LEMD1Q68G75 181 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 STUMQ69YW2 141 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 C15orf61A6NNL5 157 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 CCL25O15444 150 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 NTF3P20783 257 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 COL8A2P25067 703 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 RPL39P5Q59GN2 51 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 TECRQ9NZ01 308 aaKnown RBP19.04■□□□□ 0.64
NPAS3-206ENST00000548645 MRPL27Q9P0M9 148 aaKnown RBP19.04■□□□□ 0.64
NPAS3-206ENST00000548645 TRAV34A0A0B4J273 112 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 LINC00869P0C866 280 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 TSPOP30536 169 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 GUCD1Q96NT3 240 aa19.04■□□□□ 0.64
NPAS3-206ENST00000548645 ZNF331Q9NQX6 463 aaPredicted RBP19.03■□□□□ 0.64
NPAS3-206ENST00000548645 SERTAD4Q9NUC0 356 aa19.03■□□□□ 0.64
NPAS3-206ENST00000548645 BET1LQ9NYM9 111 aa19.03■□□□□ 0.64
NPAS3-206ENST00000548645 TET2Q6N021 2002 aaPredicted RBP19.03■□□□□ 0.64
NPAS3-206ENST00000548645 FNDC10F2Z333 226 aa19.03■□□□□ 0.64
NPAS3-206ENST00000548645 NABP2Q9BQ15 211 aa19.03■□□□□ 0.64
NPAS3-206ENST00000548645 PLEKHA3Q9HB20 300 aa19.03■□□□□ 0.64
NPAS3-206ENST00000548645 GNG10P50151 68 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 SELENOVP59797 346 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 HSPE1P61604 102 aaKnown RBP19.02■□□□□ 0.64
NPAS3-206ENST00000548645 OR5B3Q8NH48 314 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 OR4S2Q8NH73 311 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 NEUROG1Q92886 237 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 IZUMO1RA6ND01 250 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 MGST1P10620 155 aaKnown RBP19.02■□□□□ 0.64
NPAS3-206ENST00000548645 FAM90A1Q86YD7 464 aa19.02■□□□□ 0.64
NPAS3-206ENST00000548645 ZDBF2Q9HCK1 2354 aa19.02■□□□□ 0.63
NPAS3-206ENST00000548645 NKX6-3A6NJ46 265 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 USF1P22415 310 aaPredicted RBP19.01■□□□□ 0.63
NPAS3-206ENST00000548645 ANKRD39Q53RE8 183 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 LINC00696Q6ZRV3 163 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 DEFB123Q8N688 67 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 GCM1Q9NP62 436 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 HINT1P49773 126 aaPredicted RBP19.01■□□□□ 0.63
NPAS3-206ENST00000548645 PPOXP50336 477 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 ZNF738Q8NE65 137 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 OR7C2O60412 319 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 TOMM40O96008 361 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 IGLV2-8P01709 118 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 UBE2V1Q13404 147 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 RTL8BQ17RB0 113 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 CD177Q8N6Q3 437 aa19.01■□□□□ 0.63
NPAS3-206ENST00000548645 CLEC7AQ9BXN2 247 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms