RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 NSG2Q9Y328 171 aa10.01□□□□□ -0.81
CPSF6-204ENST00000547486 MARCH11A6NNE9 402 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 EIF4EP06730 217 aaKnown RBP10□□□□□ -0.81
CPSF6-204ENST00000547486 SERPINE2P07093 398 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 FGF2P09038 288 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 TRAPPC2P0DI81 140 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 TRAPPC2BP0DI82 140 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 C8orf88P0DMB2 117 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 F2RP25116 425 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 PTBP1P26599 531 aaKnown RBP eCLIP10□□□□□ -0.814e-9■■■■□ 19.3
CPSF6-204ENST00000547486 GPR183P32249 361 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 LPAR6P43657 344 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 MFAP2P55001 183 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 ZNF57Q68EA5 555 aaPredicted RBP10□□□□□ -0.81
CPSF6-204ENST00000547486 TSPAN14Q8NG11 270 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 DGCR14Q96DF8 476 aaKnown RBP10□□□□□ -0.81
CPSF6-204ENST00000547486 SRSF8Q9BRL6 282 aaKnown RBP10□□□□□ -0.81
CPSF6-204ENST00000547486 QTRT1Q9BXR0 403 aaKnown RBP10□□□□□ -0.81
CPSF6-204ENST00000547486 NDUFA4L2Q9NRX3 87 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 COMMD9Q9P000 198 aa10□□□□□ -0.81
CPSF6-204ENST00000547486 A0A087WXM4 84 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 DBX1A6NMT0 343 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 SCAF4O95104 1147 aaKnown RBP9.99□□□□□ -0.81
CPSF6-204ENST00000547486 KRASP01116 189 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 OR13C7P0DN81 318 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 HLA-DMAP28067 261 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 PRSS3P35030 304 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 G6PCP35575 357 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 BTNL8Q6UX41 500 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 GDPD1Q8N9F7 314 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 OR5H2Q8NGV7 314 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 OR6F1Q8NGZ6 308 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 SLC25A46Q96AG3 418 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 FXYD6Q9H0Q3 95 aa9.99□□□□□ -0.81
CPSF6-204ENST00000547486 IGHV3-21A0A0B4J1V1 117 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 OR2T8A6NH00 312 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 HRH1P35367 487 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 TAS2R46P59540 309 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 NCS1P62166 190 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 SLC25A24Q6NUK1 477 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 PLET1Q6UQ28 207 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 OR1L8Q8NGR8 309 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 VN1R17PQ8TDU5 208 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 GPX8Q8TED1 209 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 BORCS5Q969J3 196 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 ZNF436Q9C0F3 470 aaPredicted RBP9.98□□□□□ -0.81
CPSF6-204ENST00000547486 COMMD3Q9UBI1 195 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 OR51B2Q9Y5P1 312 aa9.98□□□□□ -0.81
CPSF6-204ENST00000547486 HYDINQ4G0P3 5121 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 F8W735 103 aaPredicted RBP9.97□□□□□ -0.81
CPSF6-204ENST00000547486 GPR31O00270 319 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 TGOLN2O43493 480 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 ERVK-16P61578 105 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 PHLDA2Q53GA4 152 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 SLC16A13Q7RTY0 426 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 OR52B4Q8NGK2 314 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 SCARB1Q8WTV0 552 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 ZNF414Q96IQ9 312 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 CHRDL1Q9BU40 450 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 FUNDC2Q9BWH2 189 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 HINT2Q9BX68 163 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 THYN1Q9P016 225 aa9.97□□□□□ -0.81
CPSF6-204ENST00000547486 MRPL27Q9P0M9 148 aaKnown RBP9.97□□□□□ -0.81
CPSF6-204ENST00000547486 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
CPSF6-204ENST00000547486 TNFAIP8O95379 198 aa9.96□□□□□ -0.82
CPSF6-204ENST00000547486 VBP1P61758 197 aa9.96□□□□□ -0.82
CPSF6-204ENST00000547486 THOC7Q6I9Y2 204 aaKnown RBP9.96□□□□□ -0.82
CPSF6-204ENST00000547486 HSD17B13Q7Z5P4 300 aaPredicted RBP9.96□□□□□ -0.82
CPSF6-204ENST00000547486 CADM3Q8N126 398 aa9.96□□□□□ -0.82
CPSF6-204ENST00000547486 LSM10Q969L4 123 aaKnown RBP9.96□□□□□ -0.82
CPSF6-204ENST00000547486 MARC2Q969Z3 335 aa9.96□□□□□ -0.82
CPSF6-204ENST00000547486 UFC1Q9Y3C8 167 aa9.96□□□□□ -0.82
CPSF6-204ENST00000547486 F11RQ9Y624 299 aaKnown RBP9.96□□□□□ -0.82
CPSF6-204ENST00000547486 LYSTQ99698 3801 aa9.96□□□□□ -0.82
CPSF6-204ENST00000547486 IGHV3OR16-8A0A075B7F1 116 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 TRAV25A0A0B4J276 109 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 K7EIM0 57 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 HPGDSO60760 199 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 SNAPC5O75971 98 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 IGKV1-39P01597 117 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 APOA1P02647 267 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 IGKV1D-39P04432 117 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 ELK1P19419 428 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 ADMP35318 185 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 ELLP55199 621 aaPredicted RBP9.95□□□□□ -0.82
CPSF6-204ENST00000547486 TSPAN5P62079 268 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 RBPMS2Q6ZRY4 209 aaKnown RBP9.95□□□□□ -0.82
CPSF6-204ENST00000547486 TBC1D26Q86UD7 250 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 SNX29P2Q8IUI4 249 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 TMEM190Q8WZ59 177 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 C5orf66Q9H5L9 145 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 TMEM14BQ9NUH8 114 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 C21orf62Q9NYP8 219 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 PRNDQ9UKY0 176 aa9.95□□□□□ -0.82
CPSF6-204ENST00000547486 ZNF207O43670 478 aaKnown RBP9.94□□□□□ -0.82
CPSF6-204ENST00000547486 OR2C3Q8N628 320 aa9.94□□□□□ -0.82
CPSF6-204ENST00000547486 OR1L6Q8NGR2 347 aa9.94□□□□□ -0.82
CPSF6-204ENST00000547486 BSCL2Q96G97 398 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms