RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 THYN1Q9P016 225 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 SMPXQ9UHP9 88 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 RAB22AQ9UL26 194 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 ETV7Q9Y603 341 aa9.26□□□□□ -0.93
SCAF11-208ENST00000546534 IGKV3-7A0A075B6H7 116 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 SLC22A5O76082 557 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 HRASP01112 189 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
SCAF11-208ENST00000546534 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 NFYAP23511 347 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-208ENST00000546534 TALDO1P37837 337 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
SCAF11-208ENST00000546534 TIMM50Q3ZCQ8 353 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 PVRIGQ6DKI7 326 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 TMEM91Q6ZNR0 172 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 POM121L12Q8N7R1 296 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 BPIFB6Q8NFQ5 453 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 BSCL2Q96G97 398 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-208ENST00000546534 GPHA2Q96T91 129 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 HSD17B10Q99714 261 aaKnown RBP9.25□□□□□ -0.93
SCAF11-208ENST00000546534 CENPOQ9BU64 300 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 PLCXD1Q9NUJ7 323 aa9.25□□□□□ -0.93
SCAF11-208ENST00000546534 ELF5Q9UKW6 265 aaPredicted RBP9.25□□□□□ -0.93
SCAF11-208ENST00000546534 IGHV3-21A0A0B4J1V1 117 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 TRAV3A0A0B4J244 114 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 IGHV4-28A0A0C4DH34 117 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 MRPS14O60783 128 aaKnown RBP9.24□□□□□ -0.93
SCAF11-208ENST00000546534 GADD45AP24522 165 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 SSX1Q16384 188 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 HES5Q5TA89 166 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 LIPKQ5VXJ0 399 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 SPSB3Q6PJ21 355 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 OR10W1Q8NGF6 305 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 MISP3Q96FF7 219 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 RNF126Q9BV68 326 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 RHPN1-AS1Q9BWJ2 59 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 MND1Q9BWT6 205 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 HRASLSQ9HDD0 168 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 FKBP14Q9NWM8 211 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 BET1LQ9NYM9 111 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 TAS2R8Q9NYW2 309 aa9.24□□□□□ -0.93
SCAF11-208ENST00000546534 LSM2Q9Y333 95 aaKnown RBP9.24□□□□□ -0.93
SCAF11-208ENST00000546534 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 IGHV7-4-1A0A0J9YVY3 117 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 C15orf61A6NNL5 157 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 C15orf62A8K5M9 175 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 CHEK1O14757 476 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 GNAO1P09471 354 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 SPHARQ15513 63 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 C10orf67Q8IYJ2 551 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 GBGT1Q8N5D6 347 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 DHRSXQ8N5I4 330 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 GDPD1Q8N9F7 314 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 ZNF414Q96IQ9 312 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 SRSF8Q9BRL6 282 aaKnown RBP9.23□□□□□ -0.93
SCAF11-208ENST00000546534 V9GY05 133 aa9.23□□□□□ -0.93
SCAF11-208ENST00000546534 PKD1P98161 4303 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 KRTAP9-6A0A140TA67 174 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 UPK2O00526 184 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 ARL6IP5O75915 188 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 P0DMU3 169 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 FAM231AP0DMU4 169 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 FAM231CP0DMU5 169 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 RPS25P62851 125 aaKnown RBP9.22□□□□□ -0.93
SCAF11-208ENST00000546534 LGALS9BQ3B8N2 356 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 FAM90A2PQ658T7 463 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 SLC25A24Q6NUK1 477 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 ZNF66Q6ZN08 573 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 C8orf59Q8N0T1 100 aaPredicted RBP9.22□□□□□ -0.93
SCAF11-208ENST00000546534 UBAC2Q8NBM4 344 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 TMEM116Q8NCL8 245 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 COMMD5Q9GZQ3 224 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 C21orf62Q9NYP8 219 aa9.22□□□□□ -0.93
SCAF11-208ENST00000546534 CYB5BO43169 146 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 AMBPP02760 352 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 SERPINE2P07093 398 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 GIG44P09565 113 aaPredicted RBP9.21□□□□□ -0.94
SCAF11-208ENST00000546534 CTXN2P0C2S0 81 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 OR13C7P0DN81 318 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 DTYMKP23919 212 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 CALRP27797 417 aaKnown RBP9.21□□□□□ -0.94
SCAF11-208ENST00000546534 WT1-ASQ06250 92 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 LEMD1Q68G75 181 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 SPAG16Q8N0X2 631 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 SCARB1Q8WTV0 552 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 UFD1Q92890 307 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 AIFM2Q9BRQ8 373 aa9.21□□□□□ -0.94
SCAF11-208ENST00000546534 QTRT1Q9BXR0 403 aaKnown RBP9.21□□□□□ -0.94
SCAF11-208ENST00000546534 IGHV3OR16-13A0A075B7E8 117 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 IGHV3-74A0A0B4J1X5 117 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 ERICH4A6NGS2 130 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 TNFSF12O43508 249 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 CTSGP08311 255 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 MIFP14174 115 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 RANBP1P43487 201 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 DEFB131AP59861 70 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 Q56UQ5 140 aa9.2□□□□□ -0.94
SCAF11-208ENST00000546534 CENPSQ8N2Z9 138 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms