RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	SSBP2	P81877	361 aa	Predicted RBP	7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	IAH1	Q2TAA2	248 aa	Predicted RBP	7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	AKIRIN2	Q53H80	203 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	AWAT1	Q58HT5	328 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	TMEM65	Q6PI78	240 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	GSG1L	Q6UXU4	331 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	C12orf54	Q6X4T0	127 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	ZNF429	Q86V71	674 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR5AU1	Q8NGC0	362 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	TMEM68	Q96MH6	324 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	COA4	Q9NYJ1	87 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	CACFD1	Q9UGQ2	172 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	ZNF257	Q9Y2Q1	563 aa		7.99	□□□□□ -1.13
CPSF7-221	ENST00000543545	C7orf66	A4D0T2	115 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	MPTX1	A8MV57	137 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	WRB	O00258	174 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	SCGB1D2	O95969	90 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	REG1A	P05451	166 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR13C7	P0DN81	318 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	PF4V1	P10720	104 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	SLC25A6	P12236	298 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	DEFA4	P12838	97 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	AREG	P15514	252 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	ERH	P84090	104 aa	Known RBP	7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	C11orf44	Q8N8P7	122 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR10W1	Q8NGF6	305 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR4X2	Q8NGF9	303 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR52E5	Q8NH55	327 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	MS4A10	Q96PG2	267 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	WNT10A	Q9GZT5	417 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	MED28	Q9H204	178 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	NDUFA4L2	Q9NRX3	87 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545	MGAT4C	Q9UBM8	478 aa		7.98	□□□□□ -1.13
CPSF7-221	ENST00000543545		A0A1B0GW64	132 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	TEX22	C9J3V5	150 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	MED6	O75586	246 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	SIX6	O95475	246 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	PSMB6	P28072	239 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	SNCA	P37840	140 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	NKX2-1	P43699	371 aa	Predicted RBP	7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	PROK1	P58294	105 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	PRCD	Q00LT1	54 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	TNFRSF9	Q07011	255 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	C2orf68	Q2NKX9	166 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	CXorf66	Q5JRM2	361 aa	Predicted RBP	7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	KHDC1L	Q5JSQ8	128 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	TEX38	Q6PEX7	206 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	C10orf99	Q6UWK7	81 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	TTC9C	Q8N5M4	171 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	COMMD1	Q8N668	190 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	C3orf56	Q8N813	242 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR5M8	Q8NGP6	311 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	FAM110D	Q8TAY7	271 aa	Predicted RBP	7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	OR10C1	Q96KK4	312 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	C2orf50	Q96LR7	162 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	SRSF8	Q9BRL6	282 aa	Known RBP	7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	MAGT1	Q9H0U3	335 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	HIPK2	Q9H2X6	1198 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	HEYL	Q9NQ87	328 aa	Predicted RBP	7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	ATR	Q13535	2644 aa		7.97	□□□□□ -1.13
CPSF7-221	ENST00000543545	NF1	P21359	2839 aa		7.96	□□□□□ -1.13
CPSF7-221	ENST00000543545	TCRBV4S1A1T	A0A5B7	111 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGLC7	A0M8Q6	106 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	CGB1	A6NKQ9	187 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	CYB5B	O43169	146 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	PITX3	O75364	302 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	FBXO24	O75426	580 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	PRH1	P02810	166 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	TRGV3	P03979	118 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	CRIP2	P52943	208 aa	Predicted RBP	7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	ASPHD1	Q5U4P2	390 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	SLC25A24	Q6NUK1	477 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	RBKS	Q9H477	322 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	ZNF580	Q9UK33	172 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	PAIP2B	Q9ULR5	123 aa	Known RBP	7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	CUBN	O60494	3623 aa		7.96	□□□□□ -1.14
CPSF7-221	ENST00000543545	NPIPB5	A8MRT5	1133 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	FAM90A26	D6RGX4	464 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	IGHG4	P01861	327 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	ELANE	P08246	267 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	CD28	P10747	220 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	IAPP	P10997	89 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	PPIF	P30405	207 aa	Known RBP	7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	RAB9A	P51151	201 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	SUB1	P53999	127 aa	Known RBP eCLIP	7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	TPPP2	P59282	170 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	S100A10	P60903	97 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	POLR2G	P62487	172 aa	Known RBP eCLIP	7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	CYCS	P99999	105 aa	Known RBP	7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	CFHR3	Q02985	330 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	WT1-AS	Q06250	92 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	FOXE3	Q13461	319 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	FCN2	Q15485	313 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	AARD	Q4LEZ3	155 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	C19orf35	Q6ZS72	473 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	LCNL1	Q6ZST4	164 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	OR2C3	Q8N628	320 aa		7.95	□□□□□ -1.14
CPSF7-221	ENST00000543545	DTD1	Q8TEA8	209 aa		7.95	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms