RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 SLC25A16P16260 332 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 F8A1P23610 371 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 CDK2P24941 298 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 SULT1A2P50226 295 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 FGF12P61328 243 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 DAD1P61803 113 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 DYNLL1P63167 89 aaKnown RBP0.94□□□□□ -2.26
PRKDC-210ENST00000541488 XRCC4Q13426 336 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 C1DQ13901 141 aaKnown RBP0.94□□□□□ -2.26
PRKDC-210ENST00000541488 PDGFRLQ15198 375 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 Q6ZRU5 148 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 YIPF7Q8N8F6 280 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 DEFB124Q8NES8 71 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 OR10A6Q8NH74 314 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 STOML3Q8TAV4 291 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 RNASEH2CQ8TDP1 164 aaKnown RBP0.94□□□□□ -2.26
PRKDC-210ENST00000541488 TNFAIP8L1Q8WVP5 186 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 ABHD14BQ96IU4 210 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 CFAP53Q96M91 514 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 MGLLQ99685 303 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 ZNF251Q9BRH9 671 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 TTTY12Q9BZ98 90 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 METTL17Q9H7H0 456 aaPredicted RBP0.94□□□□□ -2.26
PRKDC-210ENST00000541488 DNAJC12Q9UKB3 198 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 HHLA2Q9UM44 414 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 PSMD13Q9UNM6 376 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 EDC4Q6P2E9 1401 aaKnown RBP0.94□□□□□ -2.26
PRKDC-210ENST00000541488 MXRA5Q9NR99 2828 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 CSPG4Q6UVK1 2322 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 TENM2Q9NT68 2774 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 FOCADQ5VW36 1801 aa0.94□□□□□ -2.26
PRKDC-210ENST00000541488 NBASA2RRP1 2371 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 ACANP16112 2415 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 DAPK1P53355 1430 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 VPS8Q8N3P4 1428 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 IGHV3-73A0A0B4J1V6 119 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 MUC21A0A0G2JKD1 596 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 MUC21A0A140T8X8 626 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 UBFD1O14562 309 aaKnown RBP0.93□□□□□ -2.26
PRKDC-210ENST00000541488 COPEO14579 308 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 TOX3O15405 576 aaPredicted RBP0.93□□□□□ -2.26
PRKDC-210ENST00000541488 LY6HO94772 140 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 CRYBA1P05813 215 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 CD36P16671 472 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 ORM2P19652 201 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 NPPCP23582 126 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 PPP1CCP36873 323 aaKnown RBP0.93□□□□□ -2.26
PRKDC-210ENST00000541488 CRATP43155 626 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 ZNF140P52738 457 aaPredicted RBP0.93□□□□□ -2.26
PRKDC-210ENST00000541488 TAS2R45P59539 299 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 FOXF1Q12946 379 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 ZNHIT3Q15649 155 aaPredicted RBP0.93□□□□□ -2.26
PRKDC-210ENST00000541488 RASL11AQ6T310 242 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 DOLPP1Q86YN1 238 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 TMEM75Q8N9X5 138 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 OR11H1Q8NG94 326 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 FNDC9Q8TBE3 224 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 C16orf78Q8WTQ4 265 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 ACY3Q96HD9 319 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 OR7D2Q96RA2 312 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 GNB1LQ9BYB4 327 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 METTL9Q9H1A3 318 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 MED28Q9H204 178 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 C11orf1Q9H5F2 150 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 MS4A12Q9NXJ0 267 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 CD300AQ9UGN4 299 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 MYO7AQ13402 2215 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 SDK1Q7Z5N4 2213 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 NCKAP5O14513 1909 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 NUP155O75694 1391 aa0.93□□□□□ -2.26
PRKDC-210ENST00000541488 URB1O60287 2271 aaKnown RBP0.92□□□□□ -2.26
PRKDC-210ENST00000541488 LAMA4Q16363 1823 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 KIF20BQ96Q89 1820 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 HELZP42694 1942 aaKnown RBP0.92□□□□□ -2.26
PRKDC-210ENST00000541488 CEP192Q8TEP8 1941 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 HERC1Q15751 4861 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 DAPL1A0PJW8 107 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 VPS37CA5D8V6 355 aaPredicted RBP0.92□□□□□ -2.26
PRKDC-210ENST00000541488 TMEM235A6NFC5 223 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 TRPC5OSA6NMA1 111 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 H3BPC8 53 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 M0QX08 132 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 ZNF189O75820 626 aaPredicted RBP0.92□□□□□ -2.26
PRKDC-210ENST00000541488 ARL6IP5O75915 188 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 PSMG1O95456 288 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 HBZP02008 142 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 ORM1P02763 201 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 ESDP10768 282 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 RPS12P25398 132 aaKnown RBP0.92□□□□□ -2.26
PRKDC-210ENST00000541488 CD200P41217 278 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 PSMD7P51665 324 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 H2BFSP57053 126 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 TSPEAR-AS2P59090 65 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 ACTBP60709 375 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 ACTG1P63261 375 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 DEFA6Q01524 100 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 PMS2P3Q13401 168 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 SS18Q15532 418 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 TBC1D28Q2M2D7 210 aa0.92□□□□□ -2.26
PRKDC-210ENST00000541488 FAM229BQ4G0N7 80 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms